RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 CRIPAKQ8N1N5 446 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 TMEM99Q8N816 258 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 OR4M1Q8NGD0 313 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 OR51F2Q8NH61 342 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 TSNAXQ99598 290 aaKnown RBP12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 CHST6Q9GZX3 395 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 B9D1Q9UPM9 204 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 FOXJ3Q9UPW0 622 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 INMT-MINDY4F8WBC2 141 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 B3GALT4O96024 378 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 BLVRBP30043 206 aaPredicted RBP12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 GPR12P47775 334 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 GSK3AP49840 483 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 SLC37A1P57057 533 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 TMEM30BQ3MIR4 351 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 FAM214BQ7L5A3 538 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 KANSL1Q7Z3B3 1105 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 SLC38A1Q9H2H9 487 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 TUBB1Q9H4B7 451 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 FAM60AQ9NP50 221 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 LIN7CQ9NUP9 197 aaKnown RBP12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 DNAJB12Q9NXW2 375 aaKnown RBP12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 MYH15Q9Y2K3 1946 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 MCM3APO60318 1980 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 B4GALT1P15291 398 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 PTGER1P34995 402 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 LUMP51884 338 aaPredicted RBP12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 SMIM15Q7Z3B0 74 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 RAB18Q9NP72 206 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 CD96P40200 585 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 PSMB10P40306 273 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 SSBP1Q04837 148 aaKnown RBP12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 C19orf48Q6RUI8 117 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 MEX3BQ6ZN04 569 aaKnown RBP12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 CD300LFQ8TDQ1 290 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 OR2M5A3KFT3 312 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 H3BSH0 61 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 CYR61O00622 381 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 PIP5K1CO60331 668 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 GOSR1O95249 250 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 GPR6P46095 362 aaPredicted RBP12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 FXYD4P59646 89 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 DLEU7Q6UYE1 221 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 MSTNO14793 375 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 TGM6O95932 706 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 CPEP16870 476 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 PNLIPRP3Q17RR3 467 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 OR2AK2Q8NG84 335 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 GLYATL2Q8WU03 294 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 TOMM40LQ969M1 308 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 FGGYQ96C11 551 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 VSTM2LQ96N03 204 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 OR11A1Q9GZK7 315 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 EHFQ9NZC4 300 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 RFC3P40938 356 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 ZNF793Q6ZN11 406 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 PFN4Q8NHR9 129 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 PAQR8Q8TEZ7 354 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 GRAMD2BQ96HH9 432 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 ZNF251Q9BRH9 671 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 PBOV1Q9GZY1 135 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 EMC7Q9NPA0 242 aa12.04□□□□□ -0.48
PRPF38A-201ENST00000257181 A0A096LPE4 126 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 A0A1W2PPZ6 126 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 IGHV3-9P01782 118 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 ZNF728P0DKX0 622 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 CD79BP40259 229 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 DHODHQ02127 395 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 SLC17A1Q14916 467 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 C12orf45Q8N5I9 185 aaPredicted RBP12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 BRCA1P38398 1863 aaKnown RBP12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 A0A1B0GTH9 108 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 NKX2-8O15522 239 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 FAM87AP0C7U9 286 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 FAM157BP0CG42 384 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 ERHP84090 104 aaKnown RBP12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 AKR1C8PQ5T2L2 129 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 OR2W3Q7Z3T1 314 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 GCNT2Q8N0V5 402 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 OR5AS1Q8N127 324 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 FAM58AQ8N1B3 248 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 ERGIC1Q969X5 290 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 GABARAPL3Q9BY60 117 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 ZDHHC8Q9ULC8 765 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 H7C1C5 153 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 SBK2P0C263 348 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 RPS2P15880 293 aaKnown RBP12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 IST1P53990 364 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 PMPCAQ10713 525 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 KIRREL2Q6UWL6 708 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 RBMXL3Q8N7X1 1067 aaKnown RBP12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 TMEM106AQ96A25 262 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 SLC35E1Q96K37 410 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 TEAD3Q99594 435 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 RNF115Q9Y4L5 304 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 LOC107986453A0A1B0GWG9 222 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 C1QAP02745 245 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 NFYBP25208 207 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 TMEM236Q5W0B7 351 aa12.03□□□□□ -0.48
PRPF38A-201ENST00000257181 CDC20BQ86Y33 519 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms