RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 PRDX6P30041 224 aa17.7■□□□□ 0.42
NEDD8-201ENST00000250495 RBMXP38159 391 aaKnown RBP17.7■□□□□ 0.42
NEDD8-201ENST00000250495 MMP16P51512 607 aa17.7■□□□□ 0.42
NEDD8-201ENST00000250495 UBA52P62987 128 aaKnown RBP17.7■□□□□ 0.42
NEDD8-201ENST00000250495 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.7■□□□□ 0.42
NEDD8-201ENST00000250495 JAZF1Q86VZ6 243 aa17.7■□□□□ 0.42
NEDD8-201ENST00000250495 SGMS2Q8NHU3 365 aa17.7■□□□□ 0.42
NEDD8-201ENST00000250495 MEGF10Q96KG7 1140 aa17.7■□□□□ 0.42
NEDD8-201ENST00000250495 FUZQ9BT04 418 aa17.7■□□□□ 0.42
NEDD8-201ENST00000250495 MYLK2Q9H1R3 596 aa17.7■□□□□ 0.42
NEDD8-201ENST00000250495 OR5V1Q9UGF6 321 aa17.7■□□□□ 0.42
NEDD8-201ENST00000250495 LHFPL6Q9Y693 200 aa17.7■□□□□ 0.42
NEDD8-201ENST00000250495 TENM1Q9UKZ4 2725 aa17.7■□□□□ 0.42
NEDD8-201ENST00000250495 DCTN6O00399 190 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 ARPC3O15145 178 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 GADD45GO95257 159 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 PPP1R3DO95685 299 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 GPANK1O95872 356 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 WNT2P09544 360 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 SELEP16581 610 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 SLC6A6P31641 620 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 SEC61A1P61619 476 aaKnown RBP17.69■□□□□ 0.42
NEDD8-201ENST00000250495 COX10Q12887 443 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 MEP1BQ16820 701 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 SLC36A3Q495N2 470 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 LEG1Q6P5S2 330 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 PYURFQ96I23 114 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 SLC30A2Q9BRI3 323 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 HCAR1Q9BXC0 346 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 TMEM100Q9NV29 134 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 LRCH1Q9Y2L9 728 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 PPIAL4AQ9Y536 164 aa17.69■□□□□ 0.42
NEDD8-201ENST00000250495 IGLV1-36A0A0B4J1U3 117 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 LRRC30A6NM36 301 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 CEACAM18A8MTB9 384 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 IQCF6A8MYZ5 107 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 ECH1Q13011 328 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 CORO6Q6QEF8 472 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 DOK3Q7L591 496 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 OR6V1Q8N148 313 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 RNF148Q8N7C7 305 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 FAM86B1Q8N7N1 296 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 SIGLECL1Q8N7X8 197 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 OR10AD1Q8NGE0 317 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 ZNF420Q8TAQ5 688 aaPredicted RBP17.68■□□□□ 0.42
NEDD8-201ENST00000250495 FANK1Q8TC84 345 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 MCUR1Q96AQ8 359 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 NMNAT3Q96T66 252 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 CDADC1Q9BWV3 514 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 OR52D1Q9H346 318 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 TMEM165Q9HC07 324 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 MIOXQ9UGB7 285 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 DOCK11Q5JSL3 2073 aa17.68■□□□□ 0.42
NEDD8-201ENST00000250495 NOS3P29474 1203 aa17.67■□□□□ 0.42
NEDD8-201ENST00000250495 IFNGR2P38484 337 aa17.67■□□□□ 0.42
NEDD8-201ENST00000250495 SPIBQ01892 262 aa17.67■□□□□ 0.42
NEDD8-201ENST00000250495 PAX8Q06710 450 aa17.67■□□□□ 0.42
NEDD8-201ENST00000250495 FOXL1Q12952 345 aa17.67■□□□□ 0.42
NEDD8-201ENST00000250495 ZNF181Q2M3W8 571 aa17.67■□□□□ 0.42
NEDD8-201ENST00000250495 TUSC1Q2TAM9 212 aa17.67■□□□□ 0.42
NEDD8-201ENST00000250495 AWAT1Q58HT5 328 aa17.67■□□□□ 0.42
NEDD8-201ENST00000250495 COLCA1Q6ZS62 124 aa17.67■□□□□ 0.42
NEDD8-201ENST00000250495 C1orf87Q8N0U7 546 aa17.67■□□□□ 0.42
NEDD8-201ENST00000250495 SLC26A10Q8NG04 563 aa17.67■□□□□ 0.42
NEDD8-201ENST00000250495 OR4K13Q8NH42 304 aa17.67■□□□□ 0.42
NEDD8-201ENST00000250495 PITX2Q99697 317 aa17.67■□□□□ 0.42
NEDD8-201ENST00000250495 IFT27Q9BW83 186 aa17.67■□□□□ 0.42
NEDD8-201ENST00000250495 C1QTNF5Q9BXJ0 243 aa17.67■□□□□ 0.42
NEDD8-201ENST00000250495 ZNF69Q9UC07 566 aa17.67■□□□□ 0.42
NEDD8-201ENST00000250495 H0YHG0 523 aa17.66■□□□□ 0.42
NEDD8-201ENST00000250495 H0YL77 283 aa17.66■□□□□ 0.42
NEDD8-201ENST00000250495 SPRY1O43609 319 aaPredicted RBP17.66■□□□□ 0.42
NEDD8-201ENST00000250495 IDH3BO43837 385 aa17.66■□□□□ 0.42
NEDD8-201ENST00000250495 OR10H3O60404 316 aa17.66■□□□□ 0.42
NEDD8-201ENST00000250495 FSTL3O95633 263 aa17.66■□□□□ 0.42
NEDD8-201ENST00000250495 CYB5R3P00387 301 aaPredicted RBP17.66■□□□□ 0.42
NEDD8-201ENST00000250495 RPS2P15880 293 aaKnown RBP17.66■□□□□ 0.42
NEDD8-201ENST00000250495 HIST1H1CP16403 213 aaKnown RBP17.66■□□□□ 0.42
NEDD8-201ENST00000250495 PRTN3P24158 256 aa17.66■□□□□ 0.42
NEDD8-201ENST00000250495 FPR3P25089 353 aa17.66■□□□□ 0.42
NEDD8-201ENST00000250495 RSPO1Q2MKA7 263 aaPredicted RBP17.66■□□□□ 0.42
NEDD8-201ENST00000250495 KLF17Q5JT82 389 aaPredicted RBP17.66■□□□□ 0.42
NEDD8-201ENST00000250495 BTNL3Q6UXE8 466 aa17.66■□□□□ 0.42
NEDD8-201ENST00000250495 LRRN1Q6UXK5 716 aa17.66■□□□□ 0.42
NEDD8-201ENST00000250495 ZBTB46Q86UZ6 589 aa17.66■□□□□ 0.42
NEDD8-201ENST00000250495 C10orf67Q8IYJ2 551 aa17.66■□□□□ 0.42
NEDD8-201ENST00000250495 OR2AJ1Q8NGZ0 328 aa17.66■□□□□ 0.42
NEDD8-201ENST00000250495 PLEKHA8Q96JA3 519 aa17.66■□□□□ 0.42
NEDD8-201ENST00000250495 SSBP3Q9BWW4 388 aaPredicted RBP17.66■□□□□ 0.42
NEDD8-201ENST00000250495 RASSF4Q9H2L5 321 aa17.66■□□□□ 0.42
NEDD8-201ENST00000250495 ZMAT3Q9HA38 289 aaKnown RBP17.66■□□□□ 0.42
NEDD8-201ENST00000250495 RPRD1BQ9NQG5 326 aaKnown RBP17.66■□□□□ 0.42
NEDD8-201ENST00000250495 MAGEL2Q9UJ55 1249 aa17.66■□□□□ 0.42
NEDD8-201ENST00000250495 TMCC3Q9ULS5 477 aa17.66■□□□□ 0.42
NEDD8-201ENST00000250495 V9GYQ6 96 aa17.66■□□□□ 0.42
NEDD8-201ENST00000250495 F5H5K5 113 aa17.65■□□□□ 0.42
NEDD8-201ENST00000250495 F5H5P2 479 aa17.65■□□□□ 0.42
NEDD8-201ENST00000250495 MLNRO43193 412 aa17.65■□□□□ 0.42
NEDD8-201ENST00000250495 ZNF205O95201 554 aa17.65■□□□□ 0.42
NEDD8-201ENST00000250495 PPIAL4GP0DN37 164 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms