RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 NUDCD2Q8WVJ2 157 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 FAM3CQ92520 227 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 OR2A5Q96R48 311 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 LPAR3Q9UBY5 353 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 TMED7Q9Y3B3 224 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 LOC390937A0A1W2PQ73 354 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 OR4C45A6NMZ5 311 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 PPP1R2P9O14990 202 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 APBB3O95704 486 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 TSPAN15O95858 294 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 ZNF345Q14585 488 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 ZNF542PQ5EBM4 170 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 NSUN5P2Q63ZY6 315 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 MAMDC2Q7Z304 686 aaPredicted RBP12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 PRSS35Q8N3Z0 413 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 ROBO4Q8WZ75 1007 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 TEX101Q9BY14 249 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 DOK5Q9P104 306 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 MED12Q93074 2177 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 THSD7BQ9C0I4 1608 aa12.74□□□□□ -0.37
PCDHB3-201ENST00000231130 A0A1B0GWJ7 208 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 PI3P19957 117 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 RPS4Y1P22090 263 aaKnown RBP12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 PSMB6P28072 239 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 LPAR6P43657 344 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 NUBP1P53384 320 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 PPP1R1AQ13522 171 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 ZNF563Q8TA94 476 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 SP7Q8TDD2 431 aaPredicted RBP12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 PHYHIPQ92561 330 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 SEH1LQ96EE3 360 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 MRPS33Q9Y291 106 aaKnown RBP12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 CLDN4O14493 209 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 HCRTR1O43613 425 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 SRPX2O60687 465 aaPredicted RBP12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 CD74P04233 296 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 GJA4P35212 333 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 TAS2R19P59542 299 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 PPP1CAP62136 330 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 GFI1BQ5VTD9 330 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 CBLN3Q6UW01 205 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 TMPPEQ6ZT21 453 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 SLC16A9Q7RTY1 509 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 RNF166Q96A37 237 aaPredicted RBP12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 INTS14Q96SY0 518 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 PHB2Q99623 299 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 CST11Q9H112 138 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 TCEAL2Q9H3H9 227 aaPredicted RBP12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 TAS2R4Q9NYW5 299 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 TICRRQ7Z2Z1 1910 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 EIF1AYO14602 144 aaKnown RBP12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 FGF16O43320 207 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 OR2C1O95371 312 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 ZNF25P17030 456 aaPredicted RBP12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 ZNF10P21506 573 aaPredicted RBP12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 SULT1A1P50225 295 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 ADPRHP54922 357 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 HTRA3P83110 453 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 NFATC4Q14934 902 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 VWA2Q5GFL6 755 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 FHL5Q5TD97 284 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 TMEM244Q5VVB8 128 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 Q6ZRG5 221 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 PRR22Q8IZ63 422 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 KLHDC3Q9BQ90 382 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 KPTNQ9Y664 436 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 EYSQ5T1H1 3165 aa12.73□□□□□ -0.37
PCDHB3-201ENST00000231130 F10P00742 488 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 CD79AP11912 226 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 SERPINF1P36955 418 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 ACTBP60709 375 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 ACTG1P63261 375 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 MEF2DQ14814 521 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 C10orf91Q5T1B1 145 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 ZNF385CQ66K41 422 aaPredicted RBP12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 ZNF584Q8IVC4 421 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 KDM8Q8N371 416 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 UTP23Q9BRU9 249 aaKnown RBP12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 SLC17A9Q9BYT1 436 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 UCK1Q9HA47 277 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 DHDHQ9UQ10 334 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 EML5Q05BV3 1969 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 PPIHO43447 177 aaKnown RBP12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 OR8U9P0C7N5 309 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 HIST1H1BP16401 226 aaKnown RBP12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 CDX1P47902 265 aaPredicted RBP12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 NKX6-1P78426 367 aaPredicted RBP12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 ZNF550Q7Z398 422 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 SLC43A2Q8N370 569 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 OR8U1Q8NH10 309 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 VWCEQ96DN2 955 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 PRDM13Q9H4Q3 707 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 GDF2Q9UK05 429 aaPredicted RBP12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 FBXO7Q9Y3I1 522 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 TRIOO75962 3097 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 LOC100289279A0A1B0GTE1 492 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 UMAD1C9J7I0 102 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 NME2P1O60361 137 aa12.72□□□□□ -0.37
PCDHB3-201ENST00000231130 PRH1P02810 166 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms