RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 SPATA46Q5T0L3 261 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 KCTD18Q6PI47 426 aaPredicted RBP12.93□□□□□ -0.34
RPA3-201ENST00000223129 RFPL4BQ6ZWI9 263 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.93□□□□□ -0.34
RPA3-201ENST00000223129 NUP37Q8NFH4 326 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 OR1J1Q8NGS3 322 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 GGHQ92820 318 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 ZNF799Q96GE5 643 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 IKZF2Q9UKS7 526 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 FZR1Q9UM11 496 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 LRP12Q9Y561 859 aa12.93□□□□□ -0.34
RPA3-201ENST00000223129 OTX1P32242 354 aaPredicted RBP12.92□□□□□ -0.34
RPA3-201ENST00000223129 RAD52P43351 418 aa12.92□□□□□ -0.34
RPA3-201ENST00000223129 SLC6A9P48067 706 aa12.92□□□□□ -0.34
RPA3-201ENST00000223129 TPTEP56180 551 aa12.92□□□□□ -0.34
RPA3-201ENST00000223129 GRB2P62993 217 aaKnown RBP12.92□□□□□ -0.34
RPA3-201ENST00000223129 KLHL22Q53GT1 634 aa12.92□□□□□ -0.34
RPA3-201ENST00000223129 FOXB2Q5VYV0 432 aa12.92□□□□□ -0.34
RPA3-201ENST00000223129 RHOUQ7L0Q8 258 aa12.92□□□□□ -0.34
RPA3-201ENST00000223129 LHFPL3Q86UP9 236 aa12.92□□□□□ -0.34
RPA3-201ENST00000223129 ZNF283Q8N7M2 679 aa12.92□□□□□ -0.34
RPA3-201ENST00000223129 ASB17Q8WXJ9 295 aa12.92□□□□□ -0.34
RPA3-201ENST00000223129 FBXW5Q969U6 566 aa12.92□□□□□ -0.34
RPA3-201ENST00000223129 OR8B4Q96RC9 309 aa12.92□□□□□ -0.34
RPA3-201ENST00000223129 MROQ9BYG7 248 aa12.92□□□□□ -0.34
RPA3-201ENST00000223129 POFUT1Q9H488 388 aa12.92□□□□□ -0.34
RPA3-201ENST00000223129 ELOVL3Q9HB03 270 aa12.92□□□□□ -0.34
RPA3-201ENST00000223129 STARD10Q9Y365 291 aa12.92□□□□□ -0.34
RPA3-201ENST00000223129 ASH1LQ9NR48 2969 aaKnown RBP12.92□□□□□ -0.34
RPA3-201ENST00000223129 DAPL1A0PJW8 107 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 C5orf63A6NC05 138 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 PHYHO14832 338 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 FAM20BO75063 409 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 FADS2O95864 444 aaKnown RBP12.91□□□□□ -0.34
RPA3-201ENST00000223129 GLRXP35754 106 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 CX3CR1P49238 355 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 FABP6P51161 128 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 ROM1Q03395 351 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 MVKQ03426 396 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 ARL9Q6T311 187 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 PLEKHG7Q6ZR37 379 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 ZNF679Q8IYX0 411 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 ACBD7Q8N6N7 88 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 TMEM171Q8WVE6 324 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 DCLRE1CQ96SD1 692 aaKnown RBP12.91□□□□□ -0.34
RPA3-201ENST00000223129 DHRS9Q9BPW9 319 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 BRD7Q9NPI1 651 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 TBCCD1Q9NVR7 557 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 UBAP1Q9NZ09 502 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 MRM2Q9UI43 246 aaKnown RBP12.91□□□□□ -0.34
RPA3-201ENST00000223129 PCDHGB1Q9Y5G3 927 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 RAI1Q7Z5J4 1906 aaPredicted RBP12.91□□□□□ -0.34
RPA3-201ENST00000223129 TACC2O95359 2948 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 AKAP6Q13023 2319 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 DENRO43583 198 aaKnown RBP12.91□□□□□ -0.34
RPA3-201ENST00000223129 ICMTO60725 284 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 LCATP04180 440 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 PPP1CBP62140 327 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 ADIPOQQ15848 244 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 SLC25A40Q8TBP6 338 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 BCL2L14Q9BZR8 327 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 OR2J1Q9GZK6 312 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 FGF20Q9NP95 211 aaPredicted RBP12.91□□□□□ -0.34
RPA3-201ENST00000223129 PLCXD1Q9NUJ7 323 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 PSORS1C1Q9UIG5 152 aa12.91□□□□□ -0.34
RPA3-201ENST00000223129 SLC1A7O00341 560 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 IGHA1P01876 353 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 OR4A8P0C604 315 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 APOBEC3AP31941 199 aaPredicted RBP12.9□□□□□ -0.34
RPA3-201ENST00000223129 ZNF121P58317 390 aaPredicted RBP12.9□□□□□ -0.34
RPA3-201ENST00000223129 ACTC1P68032 377 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 ACTA1P68133 377 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 EGR3Q06889 387 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 SNAI3Q3KNW1 292 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 TP53I3Q53FA7 332 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 ZNF684Q5T5D7 378 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 RGS7BPQ6MZT1 257 aaPredicted RBP12.9□□□□□ -0.34
RPA3-201ENST00000223129 DRAM2Q6UX65 266 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 COLCA1Q6ZS62 124 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 LRP11Q86VZ4 500 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 ZNF611Q8N823 705 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 ZNF540Q8NDQ6 660 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 SNX33Q8WV41 574 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 DOK1Q99704 481 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 ZNF649Q9BS31 505 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 C1QTNF5Q9BXJ0 243 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 Q9H521 79 aa12.9□□□□□ -0.34
RPA3-201ENST00000223129 PTGES3LE9PB15 166 aa12.89□□□□□ -0.35
RPA3-201ENST00000223129 ANXA2P07355 339 aaKnown RBP12.89□□□□□ -0.35
RPA3-201ENST00000223129 SOD3P08294 240 aa12.89□□□□□ -0.35
RPA3-201ENST00000223129 TTKP33981 857 aa12.89□□□□□ -0.35
RPA3-201ENST00000223129 RIDAP52758 137 aaKnown RBP12.89□□□□□ -0.35
RPA3-201ENST00000223129 ST3GAL4Q11206 333 aa12.89□□□□□ -0.35
RPA3-201ENST00000223129 MED21Q13503 144 aa12.89□□□□□ -0.35
RPA3-201ENST00000223129 DEGS2Q6QHC5 323 aa12.89□□□□□ -0.35
RPA3-201ENST00000223129 AHSA2Q719I0 299 aa12.89□□□□□ -0.35
RPA3-201ENST00000223129 YIPF7Q8N8F6 280 aa12.89□□□□□ -0.35
RPA3-201ENST00000223129 SGCDQ92629 289 aa12.89□□□□□ -0.35
RPA3-201ENST00000223129 APOBEC3DQ96AK3 386 aaPredicted RBP12.89□□□□□ -0.35
RPA3-201ENST00000223129 ZNF442Q9H7R0 627 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms