RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 FADS1O60427 444 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 HOXB5P09067 269 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 GABRA1P14867 456 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 CD96P40200 585 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 SNU13P55769 128 aaKnown RBP13.47□□□□□ -0.25
EFNB1-201ENST00000204961 S100A10P60903 97 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 NKAPLQ5M9Q1 402 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 KLHL24Q6TFL4 600 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 STT3BQ8TCJ2 826 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 ADIPOR1Q96A54 375 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 ZCCHC4Q9H5U6 513 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 TRBV5-5A0A0J9YX44 114 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 TRBV11-1A0A0K0K1C0 115 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 TLCD2A6NGC4 264 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 GAAP10253 952 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 MANEAQ5SRI9 462 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 HACD4Q5VWC8 232 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 RGS7BPQ6MZT1 257 aaPredicted RBP13.47□□□□□ -0.25
EFNB1-201ENST00000204961 PAPD4Q6PIY7 484 aaKnown RBP13.47□□□□□ -0.25
EFNB1-201ENST00000204961 SLC36A1Q7Z2H8 476 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 CLEC1AQ8NC01 280 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 FAM71CQ8NEG0 241 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 LRRC46Q96FV0 321 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 ZDHHC12Q96GR4 267 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 WDR77Q9BQA1 342 aaPredicted RBP13.47□□□□□ -0.25
EFNB1-201ENST00000204961 VSIG4Q9Y279 399 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 BOD1L1Q8NFC6 3051 aa13.47□□□□□ -0.25
EFNB1-201ENST00000204961 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.46□□□□□ -0.25
EFNB1-201ENST00000204961 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.46□□□□□ -0.25
EFNB1-201ENST00000204961 CRTAPO75718 401 aaPredicted RBP13.46□□□□□ -0.25
EFNB1-201ENST00000204961 BCKDHBP21953 392 aa13.46□□□□□ -0.25
EFNB1-201ENST00000204961 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.46□□□□□ -0.25
EFNB1-201ENST00000204961 RAB12Q6IQ22 244 aa13.46□□□□□ -0.25
EFNB1-201ENST00000204961 FAM57BQ71RH2 274 aa13.46□□□□□ -0.25
EFNB1-201ENST00000204961 OR52N5Q8NH56 324 aa13.46□□□□□ -0.25
EFNB1-201ENST00000204961 METTL7AQ9H8H3 244 aa13.46□□□□□ -0.25
EFNB1-201ENST00000204961 HPF1Q9NWY4 346 aa13.46□□□□□ -0.25
EFNB1-201ENST00000204961 MBD2Q9UBB5 411 aa13.46□□□□□ -0.25
EFNB1-201ENST00000204961 OR2M5A3KFT3 312 aa13.46□□□□□ -0.25
EFNB1-201ENST00000204961 SFTPBP07988 381 aa13.46□□□□□ -0.25
EFNB1-201ENST00000204961 C4BPBP20851 252 aa13.46□□□□□ -0.25
EFNB1-201ENST00000204961 SLC25A1P53007 311 aa13.46□□□□□ -0.25
EFNB1-201ENST00000204961 KIAA2026Q5HYC2 2103 aa13.46□□□□□ -0.25
EFNB1-201ENST00000204961 C11orf40Q8WZ69 217 aa13.46□□□□□ -0.25
EFNB1-201ENST00000204961 POTEKPQ9BYX7 375 aa13.46□□□□□ -0.25
EFNB1-201ENST00000204961 SHARPINQ9H0F6 387 aa13.46□□□□□ -0.25
EFNB1-201ENST00000204961 EVA1AQ9H8M9 152 aa13.46□□□□□ -0.25
EFNB1-201ENST00000204961 PTTG3PQ9NZH4 202 aa13.46□□□□□ -0.25
EFNB1-201ENST00000204961 FREM1Q5H8C1 2179 aa13.46□□□□□ -0.26
EFNB1-201ENST00000204961 KANTRA0A1W2PQU2 76 aa13.46□□□□□ -0.26
EFNB1-201ENST00000204961 A8MVM7 634 aa13.46□□□□□ -0.26
EFNB1-201ENST00000204961 PLPP3O14495 311 aa13.46□□□□□ -0.26
EFNB1-201ENST00000204961 CTDSPLO15194 276 aa13.46□□□□□ -0.26
EFNB1-201ENST00000204961 SOCS1O15524 211 aa13.46□□□□□ -0.26
EFNB1-201ENST00000204961 TMEM176BQ3YBM2 270 aaPredicted RBP13.46□□□□□ -0.26
EFNB1-201ENST00000204961 PLXDC2Q6UX71 529 aa13.46□□□□□ -0.26
EFNB1-201ENST00000204961 C20orf196Q8IYI0 205 aa13.46□□□□□ -0.26
EFNB1-201ENST00000204961 ZNF440Q8IYI8 595 aa13.46□□□□□ -0.26
EFNB1-201ENST00000204961 ZNF283Q8N7M2 679 aa13.46□□□□□ -0.26
EFNB1-201ENST00000204961 TMPRSS13Q9BYE2 586 aa13.46□□□□□ -0.26
EFNB1-201ENST00000204961 TXNIPQ9H3M7 391 aa13.46□□□□□ -0.26
EFNB1-201ENST00000204961 ZNF701Q9NV72 531 aaPredicted RBP13.46□□□□□ -0.26
EFNB1-201ENST00000204961 POLEQ07864 2286 aa13.46□□□□□ -0.26
EFNB1-201ENST00000204961 IGHV1OR15-9A0A0B4J2B8 117 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 A0A1W2PPC1 479 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 HEXBP07686 556 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 PATE4P0C8F1 98 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 ZNF20P17024 532 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 CSF2RBP32927 897 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 AKR1C3P42330 323 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 RNF128Q8TEB7 428 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 MCHR2Q969V1 340 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 PNPLA2Q96AD5 504 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 OR6C1Q96RD1 312 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 LAT2Q9GZY6 243 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 PLEKHA1Q9HB21 404 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 OR2J2O76002 312 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 SCGB1D2O95969 90 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 EMP2P54851 167 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 TAS2R19P59542 299 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 HSD11B2P80365 405 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 ARHGEF39Q8N4T4 335 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 OR10G3Q8NGC4 313 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 TMED6Q8WW62 240 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 PIGTQ969N2 578 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 SLAMF6Q96DU3 332 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 RHBDD3Q9Y3P4 386 aa13.45□□□□□ -0.26
EFNB1-201ENST00000204961 TPRP12270 2363 aaKnown RBP13.45□□□□□ -0.26
EFNB1-201ENST00000204961 DOCK10Q96BY6 2186 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 CCDC163A0A0D9SF12 145 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 STK17BO94768 372 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 SERPINA2P20848 420 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 OR3A4PP47883 348 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 POLR2HP52434 150 aaKnown RBP13.44□□□□□ -0.26
EFNB1-201ENST00000204961 SCRN3Q0VDG4 424 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 ZNF169Q14929 603 aaPredicted RBP13.44□□□□□ -0.26
EFNB1-201ENST00000204961 FNDC7Q5VTL7 733 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 OR6N1Q8NGY5 312 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 DCUN1D4Q92564 292 aa13.44□□□□□ -0.26
EFNB1-201ENST00000204961 MLXQ9UH92 298 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms