RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 STK11Q15831 433 aa11.71□□□□□ -0.53
CTNS-201ENST00000046640 CPEB2Q7Z5Q1 589 aaKnown RBP11.71□□□□□ -0.53
CTNS-201ENST00000046640 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.71□□□□□ -0.53
CTNS-201ENST00000046640 CDH26Q8IXH8 852 aa11.71□□□□□ -0.53
CTNS-201ENST00000046640 BEST3Q8N1M1 668 aa11.71□□□□□ -0.53
CTNS-201ENST00000046640 STEAP2Q8NFT2 490 aa11.71□□□□□ -0.53
CTNS-201ENST00000046640 OR13C3Q8NGS6 347 aa11.71□□□□□ -0.53
CTNS-201ENST00000046640 OR10K1Q8NGX5 313 aa11.71□□□□□ -0.53
CTNS-201ENST00000046640 PHYHO14832 338 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 B3GALNT1O75752 331 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 OR4E1P0C645 316 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 SLC2A1P11166 492 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 CRABP1P29762 137 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 DNASE1L1P49184 302 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 STARP49675 285 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 ZNF41P51814 821 aaPredicted RBP11.71□□□□□ -0.54
CTNS-201ENST00000046640 MYBPHQ13203 477 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 NR0B2Q15466 257 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 MOGAT2Q3SYC2 334 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 RABEPKQ7Z6M1 372 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 PPP1R3BQ86XI6 285 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 CARFQ8N187 725 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 GABRG1Q8N1C3 465 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 ACBD4Q8NC06 268 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 SLC26A10Q8NG04 563 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 OR52H1Q8NGJ2 320 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 OIT3Q8WWZ8 545 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 ASB10Q8WXI3 467 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 WNT2BQ93097 391 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 GAREM1Q9H706 876 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 MYOTQ9UBF9 498 aa11.71□□□□□ -0.54
CTNS-201ENST00000046640 NOP16Q9Y3C1 178 aaKnown RBP11.71□□□□□ -0.54
CTNS-201ENST00000046640 MRPS18BQ9Y676 258 aaKnown RBP11.71□□□□□ -0.54
CTNS-201ENST00000046640 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 TMEM82A0PJX8 343 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 RAMP1O60894 148 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 MTRF1O75570 445 aaKnown RBP11.7□□□□□ -0.54
CTNS-201ENST00000046640 LUMP51884 338 aaPredicted RBP11.7□□□□□ -0.54
CTNS-201ENST00000046640 CTAG1AP78358 180 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 MFAP5Q13361 173 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 ZNF273Q14593 569 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 TEX30Q5JUR7 227 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 C12orf45Q8N5I9 185 aaPredicted RBP11.7□□□□□ -0.54
CTNS-201ENST00000046640 OR6N1Q8NGY5 312 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 ASB17Q8WXJ9 295 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 FAM46BQ96A09 425 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 OR5B2Q96R09 309 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 SPSB2Q99619 263 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 TGIF2Q9GZN2 237 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 WDR13Q9H1Z4 485 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 TAS2R3Q9NYW6 316 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 LOC107986453A0A1B0GWG9 222 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 TMEM235A6NFC5 223 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 A8MXK9 166 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 ZNF814B7Z6K7 855 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 KRBOX1C9JBD0 128 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 D6RAR5 112 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 ZNF432O94892 652 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 LDOC1O95751 146 aaPredicted RBP11.7□□□□□ -0.54
CTNS-201ENST00000046640 RHOUQ7L0Q8 258 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 SAP25Q8TEE9 199 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 CASTOR1Q8WTX7 329 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 CMBLQ96DG6 245 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 MRPS24Q96EL2 167 aaKnown RBP11.7□□□□□ -0.54
CTNS-201ENST00000046640 ZNF471Q9BX82 626 aaPredicted RBP11.7□□□□□ -0.54
CTNS-201ENST00000046640 TMPRSS13Q9BYE2 586 aa11.7□□□□□ -0.54
CTNS-201ENST00000046640 TRAV14DV4A0A0A6YYC5 116 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 H2BFMP0C1H6 154 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 GNALP38405 381 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 LPAL2Q16609 132 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 SLC22A6Q4U2R8 563 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 CATSPERDQ86XM0 798 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 FAM219AQ8IW50 185 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 OR5M9Q8NGP3 310 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 CLDN23Q96B33 292 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 DDIT4LQ96D03 193 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 SPACA5Q96QH8 159 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 DEFB126Q9BYW3 111 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 CHST11Q9NPF2 352 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 SERINC1Q9NRX5 453 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 CKLFQ9UBR5 152 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 OR52A1Q9UKL2 312 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 FAM74A7A6NL05 159 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 HMSDA8MTL9 139 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 CD2P06729 351 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 FGF2P09038 288 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 CSRP1P21291 193 aaKnown RBP11.69□□□□□ -0.54
CTNS-201ENST00000046640 APOBEC1P41238 236 aaKnown RBP11.69□□□□□ -0.54
CTNS-201ENST00000046640 PRKXP51817 358 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 GFOD2Q3B7J2 385 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 FAM74A3Q4VXF1 159 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 CCDC157Q569K6 752 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 UNQ6126/PRO20091Q6UXV3 157 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 PXT1Q8NFP0 134 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 C11orf40Q8WZ69 217 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 JSRP1Q96MG2 331 aaPredicted RBP11.69□□□□□ -0.54
CTNS-201ENST00000046640 EML6Q6ZMW3 1958 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 IGLV3-12A0A075B6K2 115 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 OR6C65A6NJZ3 312 aa11.69□□□□□ -0.54
CTNS-201ENST00000046640 CCL4P13236 92 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms