RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TSSK2Q96PF2 358 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 MED4Q9NPJ6 270 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 ZNF69Q9UC07 566 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 MEGF8Q7Z7M0 2845 aa13.31□□□□□ -0.28
ERCC1-201ENST00000013807 SPRY1O43609 319 aaPredicted RBP13.3□□□□□ -0.28
ERCC1-201ENST00000013807 IDH3BO43837 385 aa13.3□□□□□ -0.28
ERCC1-201ENST00000013807 FPR3P25089 353 aa13.3□□□□□ -0.28
ERCC1-201ENST00000013807 CD80P33681 288 aa13.3□□□□□ -0.28
ERCC1-201ENST00000013807 ARMCX4Q5H9R4 360 aa13.3□□□□□ -0.28
ERCC1-201ENST00000013807 OTPQ5XKR4 325 aa13.3□□□□□ -0.28
ERCC1-201ENST00000013807 SLC18B1Q6NT16 456 aa13.3□□□□□ -0.28
ERCC1-201ENST00000013807 C1orf94Q6P1W5 598 aa13.3□□□□□ -0.28
ERCC1-201ENST00000013807 RBMS3Q6XE24 437 aaKnown RBP13.3□□□□□ -0.28
ERCC1-201ENST00000013807 ATG16L2Q8NAA4 619 aa13.3□□□□□ -0.28
ERCC1-201ENST00000013807 C22orf15Q8WYQ4 148 aa13.3□□□□□ -0.28
ERCC1-201ENST00000013807 ERGIC1Q969X5 290 aa13.3□□□□□ -0.28
ERCC1-201ENST00000013807 PYURFQ96I23 114 aa13.3□□□□□ -0.28
ERCC1-201ENST00000013807 C1orf147Q96MC9 270 aaPredicted RBP13.3□□□□□ -0.28
ERCC1-201ENST00000013807 ERMAPQ96PL5 475 aaPredicted RBP13.3□□□□□ -0.28
ERCC1-201ENST00000013807 MRI1Q9BV20 369 aa13.3□□□□□ -0.28
ERCC1-201ENST00000013807 ZNF747Q9BV97 191 aa13.3□□□□□ -0.28
ERCC1-201ENST00000013807 OR52D1Q9H346 318 aa13.3□□□□□ -0.28
ERCC1-201ENST00000013807 RERGLQ9H628 205 aa13.3□□□□□ -0.28
ERCC1-201ENST00000013807 MIOXQ9UGB7 285 aa13.3□□□□□ -0.28
ERCC1-201ENST00000013807 CYB5R1Q9UHQ9 305 aa13.3□□□□□ -0.28
ERCC1-201ENST00000013807 H0YL77 283 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 ACSM4P0C7M7 580 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 HSD17B1P14061 328 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 SELEP16581 610 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 SLC6A6P31641 620 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 GGT2P36268 569 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 GSSP48637 474 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 KRT72Q14CN4 511 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 MEP1BQ16820 701 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 ZNF404Q494X3 552 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 HSP90B2PQ58FF3 399 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 LRRN1Q6UXK5 716 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 ZNF771Q7L3S4 317 aaPredicted RBP13.29□□□□□ -0.28
ERCC1-201ENST00000013807 OR5AS1Q8N127 324 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 SIGLECL1Q8N7X8 197 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 OR52J3Q8NH60 311 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 Q8TCH9 128 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 UPRTQ96BW1 309 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 NMNAT3Q96T66 252 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 SSBP3Q9BWW4 388 aaPredicted RBP13.29□□□□□ -0.28
ERCC1-201ENST00000013807 PNRC2Q9NPJ4 139 aaKnown RBP13.29□□□□□ -0.28
ERCC1-201ENST00000013807 TMEM100Q9NV29 134 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 PTTG3PQ9NZH4 202 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 OR5V1Q9UGF6 321 aa13.29□□□□□ -0.28
ERCC1-201ENST00000013807 KIR2DS1A0A191URI9 304 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 DIRAS1O95057 198 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 GADD45GO95257 159 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 GPANK1O95872 356 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 PLATP00750 562 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 HIST1H1CP16403 213 aaKnown RBP13.28□□□□□ -0.28
ERCC1-201ENST00000013807 PMELP40967 661 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 HMGA2P52926 109 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 MAB21L1Q13394 359 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 GK2Q14410 553 aaPredicted RBP13.28□□□□□ -0.28
ERCC1-201ENST00000013807 SLC36A3Q495N2 470 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 LEG1Q6P5S2 330 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 CORO6Q6QEF8 472 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 KLBQ86Z14 1044 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 C1orf87Q8N0U7 546 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 OR10AD1Q8NGE0 317 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 ZNF420Q8TAQ5 688 aaPredicted RBP13.28□□□□□ -0.28
ERCC1-201ENST00000013807 ZNF48Q96MX3 618 aaPredicted RBP13.28□□□□□ -0.28
ERCC1-201ENST00000013807 DDOQ99489 341 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 TMEM246Q9BRR3 403 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 HCAR1Q9BXC0 346 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 PRDM13Q9H4Q3 707 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 SRA1Q9HD15 236 aaKnown RBP13.28□□□□□ -0.28
ERCC1-201ENST00000013807 CD300AQ9UGN4 299 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 KCNG2Q9UJ96 466 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 POLR1DQ9Y2S0 133 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 PPIAL4AQ9Y536 164 aa13.28□□□□□ -0.28
ERCC1-201ENST00000013807 IGHV2-70DA0A0C4DH43 119 aa13.27□□□□□ -0.29
ERCC1-201ENST00000013807 OR6C68A6NDL8 312 aa13.27□□□□□ -0.29
ERCC1-201ENST00000013807 LRRC30A6NM36 301 aa13.27□□□□□ -0.29
ERCC1-201ENST00000013807 GMNNO75496 209 aa13.27□□□□□ -0.29
ERCC1-201ENST00000013807 PTBP3O95758 552 aaKnown RBP13.27□□□□□ -0.29
ERCC1-201ENST00000013807 RENP00797 406 aa13.27□□□□□ -0.29
ERCC1-201ENST00000013807 RNASE1P07998 156 aaKnown RBP13.27□□□□□ -0.29
ERCC1-201ENST00000013807 OTX1P32242 354 aaPredicted RBP13.27□□□□□ -0.29
ERCC1-201ENST00000013807 CD200P41217 278 aa13.27□□□□□ -0.29
ERCC1-201ENST00000013807 RAD23AP54725 363 aa13.27□□□□□ -0.29
ERCC1-201ENST00000013807 PRR31Q5SQ13 230 aa13.27□□□□□ -0.29
ERCC1-201ENST00000013807 CFAP77Q6ZQR2 320 aa13.27□□□□□ -0.29
ERCC1-201ENST00000013807 BCL6BQ8N143 479 aaPredicted RBP13.27□□□□□ -0.29
ERCC1-201ENST00000013807 FANK1Q8TC84 345 aa13.27□□□□□ -0.29
ERCC1-201ENST00000013807 RAB40AQ8WXH6 277 aa13.27□□□□□ -0.29
ERCC1-201ENST00000013807 NEIL1Q96FI4 390 aaPredicted RBP13.27□□□□□ -0.29
ERCC1-201ENST00000013807 PLEKHA8Q96JA3 519 aa13.27□□□□□ -0.29
ERCC1-201ENST00000013807 ATF6BQ99941 703 aa13.27□□□□□ -0.29
ERCC1-201ENST00000013807 IL1RAPQ9NPH3 570 aa13.27□□□□□ -0.29
ERCC1-201ENST00000013807 MAGEL2Q9UJ55 1249 aa13.27□□□□□ -0.29
ERCC1-201ENST00000013807 TRRAPQ9Y4A5 3859 aa13.27□□□□□ -0.29
ERCC1-201ENST00000013807 DNAJC9-AS1A6NH13 148 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 F5H5P2 479 aa13.26□□□□□ -0.29
ERCC1-201ENST00000013807 CYB5R3P00387 301 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms