RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 SLX4IPQ5VYV7 408 aa22.84■■□□□ 1.25
VEGFA-231ENST00000640499 C12orf73Q69YU5 71 aa22.84■■□□□ 1.25
VEGFA-231ENST00000640499 NAA40Q86UY6 237 aa22.84■■□□□ 1.25
VEGFA-231ENST00000640499 OR2AJ1Q8NGZ0 328 aa22.84■■□□□ 1.25
VEGFA-231ENST00000640499 KLF14Q8TD94 323 aaPredicted RBP22.84■■□□□ 1.25
VEGFA-231ENST00000640499 GTF3AQ92664 365 aaKnown RBP22.84■■□□□ 1.25
VEGFA-231ENST00000640499 TPK1Q9H3S4 243 aa22.84■■□□□ 1.25
VEGFA-231ENST00000640499 TAAR3PQ9P1P4 343 aa22.84■■□□□ 1.25
VEGFA-231ENST00000640499 M0R129 80 aa22.83■■□□□ 1.25
VEGFA-231ENST00000640499 IGHV3-13P01766 116 aa22.83■■□□□ 1.25
VEGFA-231ENST00000640499 NAT2P11245 290 aa22.83■■□□□ 1.25
VEGFA-231ENST00000640499 IGFBP5P24593 272 aa22.83■■□□□ 1.25
VEGFA-231ENST00000640499 KLF3P57682 345 aaPredicted RBP22.83■■□□□ 1.25
VEGFA-231ENST00000640499 SNAPC1Q16533 368 aa22.83■■□□□ 1.25
VEGFA-231ENST00000640499 MBNL2Q5VZF2 373 aaKnown RBP22.83■■□□□ 1.25
VEGFA-231ENST00000640499 TIGD4Q8IY51 512 aa22.83■■□□□ 1.25
VEGFA-231ENST00000640499 ST7LQ8TDW4 575 aa22.83■■□□□ 1.25
VEGFA-231ENST00000640499 IPCEF1Q8WWN9 437 aaPredicted RBP22.83■■□□□ 1.25
VEGFA-231ENST00000640499 PITX2Q99697 317 aa22.83■■□□□ 1.25
VEGFA-231ENST00000640499 ELOVL3Q9HB03 270 aa22.83■■□□□ 1.25
VEGFA-231ENST00000640499 DYNLRB1Q9NP97 96 aa22.83■■□□□ 1.25
VEGFA-231ENST00000640499 IGHV4-30-2A0A087WSY4 118 aa22.82■■□□□ 1.24
VEGFA-231ENST00000640499 M0R233 179 aa22.82■■□□□ 1.24
VEGFA-231ENST00000640499 SPARCP09486 303 aa22.82■■□□□ 1.24
VEGFA-231ENST00000640499 ACSM4P0C7M7 580 aa22.82■■□□□ 1.24
VEGFA-231ENST00000640499 ANOS1P23352 680 aa22.82■■□□□ 1.24
VEGFA-231ENST00000640499 GSTT1P30711 240 aa22.82■■□□□ 1.24
VEGFA-231ENST00000640499 ZNF718Q3SXZ3 478 aa22.82■■□□□ 1.24
VEGFA-231ENST00000640499 COLCA1Q6ZS62 124 aa22.82■■□□□ 1.24
VEGFA-231ENST00000640499 DCXRQ7Z4W1 244 aa22.82■■□□□ 1.24
VEGFA-231ENST00000640499 ZMYND19Q96E35 227 aaPredicted RBP22.82■■□□□ 1.24
VEGFA-231ENST00000640499 COX4I2Q96KJ9 171 aa22.82■■□□□ 1.24
VEGFA-231ENST00000640499 DCLRE1CQ96SD1 692 aaKnown RBP22.82■■□□□ 1.24
VEGFA-231ENST00000640499 ATF6BQ99941 703 aa22.82■■□□□ 1.24
VEGFA-231ENST00000640499 GABARAPL3Q9BY60 117 aa22.82■■□□□ 1.24
VEGFA-231ENST00000640499 DDX28Q9NUL7 540 aaKnown RBP22.82■■□□□ 1.24
VEGFA-231ENST00000640499 ZANQ9Y493 2812 aa22.81■■□□□ 1.24
VEGFA-231ENST00000640499 A0A1W2PPW3 197 aa22.81■■□□□ 1.24
VEGFA-231ENST00000640499 ANKRD65E5RJM6 399 aa22.81■■□□□ 1.24
VEGFA-231ENST00000640499 ALPLP05186 524 aa22.81■■□□□ 1.24
VEGFA-231ENST00000640499 PAICSP22234 425 aaKnown RBP22.81■■□□□ 1.24
VEGFA-231ENST00000640499 BLVRAP53004 296 aa22.81■■□□□ 1.24
VEGFA-231ENST00000640499 BCDIN3DQ7Z5W3 292 aaKnown RBP22.81■■□□□ 1.24
VEGFA-231ENST00000640499 AMELYQ99218 206 aa22.81■■□□□ 1.24
VEGFA-231ENST00000640499 SMR3AQ99954 134 aa22.81■■□□□ 1.24
VEGFA-231ENST00000640499 RBM4BQ9BQ04 359 aaKnown RBP22.81■■□□□ 1.24
VEGFA-231ENST00000640499 RAB1BQ9H0U4 201 aa22.81■■□□□ 1.24
VEGFA-231ENST00000640499 FBXO9Q9UK97 447 aaPredicted RBP22.81■■□□□ 1.24
VEGFA-231ENST00000640499 CCDC182A6NF36 153 aa22.8■■□□□ 1.24
VEGFA-231ENST00000640499 E9PQ18 207 aa22.8■■□□□ 1.24
VEGFA-231ENST00000640499 FOSL1P15407 271 aa22.8■■□□□ 1.24
VEGFA-231ENST00000640499 MMP15P51511 669 aa22.8■■□□□ 1.24
VEGFA-231ENST00000640499 PSG7Q13046 419 aa22.8■■□□□ 1.24
VEGFA-231ENST00000640499 ARL9Q6T311 187 aa22.8■■□□□ 1.24
VEGFA-231ENST00000640499 CXXC5Q7LFL8 322 aaKnown RBP22.8■■□□□ 1.24
VEGFA-231ENST00000640499 C10orf67Q8IYJ2 551 aa22.8■■□□□ 1.24
VEGFA-231ENST00000640499 C1orf174Q8IYL3 243 aa22.8■■□□□ 1.24
VEGFA-231ENST00000640499 C18orf12Q96KH6 178 aa22.8■■□□□ 1.24
VEGFA-231ENST00000640499 INTS14Q96SY0 518 aa22.8■■□□□ 1.24
VEGFA-231ENST00000640499 USE1Q9NZ43 259 aa22.8■■□□□ 1.24
VEGFA-231ENST00000640499 A0A096LNT2 108 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 RNF223E7ERA6 249 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 EI24O14681 340 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 PRODHO43272 600 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 SELENOFO60613 162 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 OTX1P32242 354 aaPredicted RBP22.79■■□□□ 1.24
VEGFA-231ENST00000640499 GABPB1Q06547 395 aaPredicted RBP22.79■■□□□ 1.24
VEGFA-231ENST00000640499 ECH1Q13011 328 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 KLHL12Q53G59 568 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 UNQ6126/PRO20091Q6UXV3 157 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 DPY19L4Q7Z388 723 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 ERI1Q8IV48 349 aaKnown RBP22.79■■□□□ 1.24
VEGFA-231ENST00000640499 PQLC1Q8N2U9 271 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 CBR4Q8N4T8 237 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 C10orf105Q8TEF2 133 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 NEU4Q8WWR8 484 aaPredicted RBP22.79■■□□□ 1.24
VEGFA-231ENST00000640499 SLAMF6Q96DU3 332 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 PLEKHA8Q96JA3 519 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 SLC29A1Q99808 456 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 C1QTNF5Q9BXJ0 243 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 MS4A5Q9H3V2 200 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 GSX1Q9H4S2 264 aaPredicted RBP22.79■■□□□ 1.24
VEGFA-231ENST00000640499 CR1P17927 2039 aa22.79■■□□□ 1.24
VEGFA-231ENST00000640499 C5orf63A6NC05 138 aa22.78■■□□□ 1.24
VEGFA-231ENST00000640499 F5H5K5 113 aa22.78■■□□□ 1.24
VEGFA-231ENST00000640499 H3BSA7 217 aa22.78■■□□□ 1.24
VEGFA-231ENST00000640499 ZSCAN26Q16670 478 aa22.78■■□□□ 1.24
VEGFA-231ENST00000640499 SLC35D3Q5M8T2 416 aa22.78■■□□□ 1.24
VEGFA-231ENST00000640499 AADACL4Q5VUY2 407 aa22.78■■□□□ 1.24
VEGFA-231ENST00000640499 TCEANCQ8N8B7 351 aa22.78■■□□□ 1.24
VEGFA-231ENST00000640499 OR6N2Q8NGY6 317 aa22.78■■□□□ 1.24
VEGFA-231ENST00000640499 TEAD3Q99594 435 aa22.78■■□□□ 1.24
VEGFA-231ENST00000640499 TEX12Q9BXU0 123 aa22.78■■□□□ 1.24
VEGFA-231ENST00000640499 REG4Q9BYZ8 158 aa22.78■■□□□ 1.24
VEGFA-231ENST00000640499 RIBC2Q9H4K1 309 aa22.78■■□□□ 1.24
VEGFA-231ENST00000640499 SLCO1C1Q9NYB5 712 aa22.78■■□□□ 1.24
VEGFA-231ENST00000640499 C17orf100A8MU93 164 aa22.77■■□□□ 1.24
VEGFA-231ENST00000640499 SMAD7O15105 426 aaKnown RBP22.77■■□□□ 1.24
VEGFA-231ENST00000640499 TLX2O43763 284 aaPredicted RBP22.77■■□□□ 1.24
VEGFA-231ENST00000640499 NCR1O76036 304 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms