RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 MGAM2Q2M2H8 2515 aa15.53■□□□□ 0.08
CLN6-220ENST00000637450 TRRAPQ9Y4A5 3859 aa15.52■□□□□ 0.08
CLN6-220ENST00000637450 A8MXK9 166 aa15.52■□□□□ 0.08
CLN6-220ENST00000637450 SOCS2O14508 198 aa15.52■□□□□ 0.08
CLN6-220ENST00000637450 SPRY1O43609 319 aaPredicted RBP15.52■□□□□ 0.08
CLN6-220ENST00000637450 RHCEP18577 417 aa15.52■□□□□ 0.08
CLN6-220ENST00000637450 MDH2P40926 338 aaKnown RBP15.52■□□□□ 0.08
CLN6-220ENST00000637450 CDKN2AP42771 156 aaKnown RBP15.52■□□□□ 0.08
CLN6-220ENST00000637450 HIST1H3AP68431 136 aa15.52■□□□□ 0.08
CLN6-220ENST00000637450 HLXQ14774 488 aaPredicted RBP15.52■□□□□ 0.08
CLN6-220ENST00000637450 AWAT1Q58HT5 328 aa15.52■□□□□ 0.08
CLN6-220ENST00000637450 HIST2H3PS2Q5TEC6 136 aa15.52■□□□□ 0.08
CLN6-220ENST00000637450 SLC27A4Q6P1M0 643 aa15.52■□□□□ 0.08
CLN6-220ENST00000637450 HIST2H3AQ71DI3 136 aa15.52■□□□□ 0.08
CLN6-220ENST00000637450 OR5AS1Q8N127 324 aa15.52■□□□□ 0.08
CLN6-220ENST00000637450 ATG16L2Q8NAA4 619 aa15.52■□□□□ 0.08
CLN6-220ENST00000637450 OR5L1Q8NGL2 311 aa15.52■□□□□ 0.08
CLN6-220ENST00000637450 RSRC1Q96IZ7 334 aaKnown RBP15.52■□□□□ 0.08
CLN6-220ENST00000637450 C7orf34Q96L11 122 aa15.52■□□□□ 0.08
CLN6-220ENST00000637450 DDX28Q9NUL7 540 aaKnown RBP15.52■□□□□ 0.08
CLN6-220ENST00000637450 ABCD2Q9UBJ2 740 aa15.52■□□□□ 0.08
CLN6-220ENST00000637450 NUP50Q9UKX7 468 aa15.52■□□□□ 0.08
CLN6-220ENST00000637450 PPIAL4AQ9Y536 164 aa15.52■□□□□ 0.08
CLN6-220ENST00000637450 INSIG2Q9Y5U4 225 aa15.52■□□□□ 0.08
CLN6-220ENST00000637450 TANC2Q9HCD6 1990 aa15.51■□□□□ 0.07
CLN6-220ENST00000637450 TRBV4-1A0A0J9YWV2 114 aa15.51■□□□□ 0.07
CLN6-220ENST00000637450 UNC119BA6NIH7 251 aa15.51■□□□□ 0.07
CLN6-220ENST00000637450 IFNL4K9M1U5 179 aa15.51■□□□□ 0.07
CLN6-220ENST00000637450 MMP16P51512 607 aa15.51■□□□□ 0.07
CLN6-220ENST00000637450 RPS6KA3P51812 740 aa15.51■□□□□ 0.07
CLN6-220ENST00000637450 SEC23BQ15437 767 aa15.51■□□□□ 0.07
CLN6-220ENST00000637450 ARMCX4Q5H9R4 360 aa15.51■□□□□ 0.07
CLN6-220ENST00000637450 FGD3Q5JSP0 725 aa15.51■□□□□ 0.07
CLN6-220ENST00000637450 KLF17Q5JT82 389 aaPredicted RBP15.51■□□□□ 0.07
CLN6-220ENST00000637450 OR2T2Q6IF00 324 aa15.51■□□□□ 0.07
CLN6-220ENST00000637450 SIGLECL1Q8N7X8 197 aa15.51■□□□□ 0.07
CLN6-220ENST00000637450 GJC3Q8NFK1 279 aa15.51■□□□□ 0.07
CLN6-220ENST00000637450 OR8G5Q8NG78 346 aa15.51■□□□□ 0.07
CLN6-220ENST00000637450 GPA33Q99795 319 aa15.51■□□□□ 0.07
CLN6-220ENST00000637450 DCAF13Q9NV06 445 aaKnown RBP15.51■□□□□ 0.07
CLN6-220ENST00000637450 ZNF446Q9NWS9 450 aa15.51■□□□□ 0.07
CLN6-220ENST00000637450 PTTG3PQ9NZH4 202 aa15.51■□□□□ 0.07
CLN6-220ENST00000637450 ZNF69Q9UC07 566 aa15.51■□□□□ 0.07
CLN6-220ENST00000637450 DCTN6O00399 190 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 GPANK1O95872 356 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 WNT2P09544 360 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 CPT2P23786 658 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 NUDT2P50583 147 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 PSME3P61289 254 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 PAX8Q06710 450 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 RSPO1Q2MKA7 263 aaPredicted RBP15.5■□□□□ 0.07
CLN6-220ENST00000637450 ESCO2Q56NI9 601 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 GLYATQ6IB77 296 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 RBMS3Q6XE24 437 aaKnown RBP15.5■□□□□ 0.07
CLN6-220ENST00000637450 DOK3Q7L591 496 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 MUC20Q8N307 709 aaPredicted RBP15.5■□□□□ 0.07
CLN6-220ENST00000637450 OR13G1Q8NGZ3 307 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 APOBEC3DQ96AK3 386 aaPredicted RBP15.5■□□□□ 0.07
CLN6-220ENST00000637450 MEGF10Q96KG7 1140 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 DHRS1Q96LJ7 313 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 ZNF582Q96NG8 517 aaPredicted RBP15.5■□□□□ 0.07
CLN6-220ENST00000637450 TSSK2Q96PF2 358 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 COQ7Q99807 217 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 FUZQ9BT04 418 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 TMEM165Q9HC07 324 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 AURKCQ9UQB9 309 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 LHFPL6Q9Y693 200 aa15.5■□□□□ 0.07
CLN6-220ENST00000637450 CEACAM18A8MTB9 384 aa15.49■□□□□ 0.07
CLN6-220ENST00000637450 DIRAS1O95057 198 aa15.49■□□□□ 0.07
CLN6-220ENST00000637450 PRTN3P24158 256 aa15.49■□□□□ 0.07
CLN6-220ENST00000637450 CRABP1P29762 137 aa15.49■□□□□ 0.07
CLN6-220ENST00000637450 MEP1BQ16820 701 aa15.49■□□□□ 0.07
CLN6-220ENST00000637450 PGM2L1Q6PCE3 622 aa15.49■□□□□ 0.07
CLN6-220ENST00000637450 SMARCD3Q6STE5 483 aa15.49■□□□□ 0.07
CLN6-220ENST00000637450 BCL6BQ8N143 479 aaPredicted RBP15.49■□□□□ 0.07
CLN6-220ENST00000637450 OR10AD1Q8NGE0 317 aa15.49■□□□□ 0.07
CLN6-220ENST00000637450 OR52J3Q8NH60 311 aa15.49■□□□□ 0.07
CLN6-220ENST00000637450 ZNF420Q8TAQ5 688 aaPredicted RBP15.49■□□□□ 0.07
CLN6-220ENST00000637450 SLC30A2Q9BRI3 323 aa15.49■□□□□ 0.07
CLN6-220ENST00000637450 MRI1Q9BV20 369 aa15.49■□□□□ 0.07
CLN6-220ENST00000637450 HDHD2Q9H0R4 259 aa15.49■□□□□ 0.07
CLN6-220ENST00000637450 KRCC1Q9NPI7 259 aaPredicted RBP15.49■□□□□ 0.07
CLN6-220ENST00000637450 B9D1Q9UPM9 204 aa15.49■□□□□ 0.07
CLN6-220ENST00000637450 LRCH1Q9Y2L9 728 aa15.49■□□□□ 0.07
CLN6-220ENST00000637450 POLR1DQ9Y2S0 133 aa15.49■□□□□ 0.07
CLN6-220ENST00000637450 IGLV1-36A0A0B4J1U3 117 aa15.48■□□□□ 0.07
CLN6-220ENST00000637450 H0YL77 283 aa15.48■□□□□ 0.07
CLN6-220ENST00000637450 HKR1P10072 659 aa15.48■□□□□ 0.07
CLN6-220ENST00000637450 CD80P33681 288 aa15.48■□□□□ 0.07
CLN6-220ENST00000637450 CENPAP49450 140 aa15.48■□□□□ 0.07
CLN6-220ENST00000637450 SRP9P49458 86 aaKnown RBP15.48■□□□□ 0.07
CLN6-220ENST00000637450 PAX2Q02962 417 aa15.48■□□□□ 0.07
CLN6-220ENST00000637450 COX10Q12887 443 aa15.48■□□□□ 0.07
CLN6-220ENST00000637450 DNM1P34Q6PK57 102 aa15.48■□□□□ 0.07
CLN6-220ENST00000637450 COLCA1Q6ZS62 124 aa15.48■□□□□ 0.07
CLN6-220ENST00000637450 FAM86B1Q8N7N1 296 aa15.48■□□□□ 0.07
CLN6-220ENST00000637450 CMTM5Q96DZ9 223 aa15.48■□□□□ 0.07
CLN6-220ENST00000637450 ERMAPQ96PL5 475 aaPredicted RBP15.48■□□□□ 0.07
CLN6-220ENST00000637450 SRA1Q9HD15 236 aaKnown RBP15.48■□□□□ 0.07
CLN6-220ENST00000637450 OR5V1Q9UGF6 321 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms