RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 RPL36Q9Y3U8 105 aaKnown RBP13.84□□□□□ -0.19
CLN6-216ENST00000636876 AKAP6Q13023 2319 aa13.83□□□□□ -0.2
CLN6-216ENST00000636876 DBHP09172 617 aa13.83□□□□□ -0.2
CLN6-216ENST00000636876 CCNOP22674 350 aa13.83□□□□□ -0.2
CLN6-216ENST00000636876 RSPO1Q2MKA7 263 aaPredicted RBP13.83□□□□□ -0.2
CLN6-216ENST00000636876 KRTAP27-1Q3LI81 207 aa13.83□□□□□ -0.2
CLN6-216ENST00000636876 LAIR2Q6ISS4 152 aa13.83□□□□□ -0.2
CLN6-216ENST00000636876 SPATC1Q76KD6 591 aa13.83□□□□□ -0.2
CLN6-216ENST00000636876 TMEM200AQ86VY9 491 aa13.83□□□□□ -0.2
CLN6-216ENST00000636876 LILRB1Q8NHL6 650 aaPredicted RBP13.83□□□□□ -0.2
CLN6-216ENST00000636876 ASB17Q8WXJ9 295 aa13.83□□□□□ -0.2
CLN6-216ENST00000636876 NEUROG1Q92886 237 aa13.83□□□□□ -0.2
CLN6-216ENST00000636876 LGALS12Q96DT0 336 aa13.83□□□□□ -0.2
CLN6-216ENST00000636876 DCLRE1CQ96SD1 692 aaKnown RBP13.83□□□□□ -0.2
CLN6-216ENST00000636876 COPS4Q9BT78 406 aa13.83□□□□□ -0.2
CLN6-216ENST00000636876 CLEC4MQ9H2X3 399 aaPredicted RBP13.83□□□□□ -0.2
CLN6-216ENST00000636876 MRPS18AQ9NVS2 196 aaKnown RBP13.83□□□□□ -0.2
CLN6-216ENST00000636876 EXOGQ9Y2C4 368 aaKnown RBP13.83□□□□□ -0.2
CLN6-216ENST00000636876 ATP23Q9Y6H3 246 aa13.83□□□□□ -0.2
CLN6-216ENST00000636876 SPG11Q96JI7 2443 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 ZNF670-ZNF695F2Z2N8 137 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 J3QRE1 110 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 PHYHO14832 338 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 OR2T7P0C7T2 308 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 PRF1P14222 555 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 NR4A1P22736 598 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 PCSK6P29122 969 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 OPRL1P41146 370 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 WNT5AP41221 380 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 SLC15A1P46059 708 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 GALK2Q01415 458 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 TAF13Q15543 124 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 ZNF672Q499Z4 452 aaPredicted RBP13.82□□□□□ -0.2
CLN6-216ENST00000636876 RHOUQ7L0Q8 258 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 RFLNBQ8N5W9 214 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 OR10H4Q8NGA5 316 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 OR2T27Q8NH04 317 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 SPTSSAQ969W0 71 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 TBX5Q99593 518 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 POU2F3Q9UKI9 436 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 SPEF1Q9Y4P9 236 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 PCDHGB1Q9Y5G3 927 aa13.82□□□□□ -0.2
CLN6-216ENST00000636876 PRR32B1ATL7 298 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 ICMTO60725 284 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 ABHD16AO95870 558 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 H2BFMP0C1H6 154 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 ACSM4P0C7M7 580 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 OTX1P32242 354 aaPredicted RBP13.81□□□□□ -0.2
CLN6-216ENST00000636876 CXCR4P61073 352 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 GRB2P62993 217 aaKnown RBP13.81□□□□□ -0.2
CLN6-216ENST00000636876 NKX6-1P78426 367 aaPredicted RBP13.81□□□□□ -0.2
CLN6-216ENST00000636876 ROM1Q03395 351 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 RAB40BQ12829 278 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 SNTB2Q13425 540 aaKnown RBP13.81□□□□□ -0.2
CLN6-216ENST00000636876 KLHL22Q53GT1 634 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 C6orf141Q5SZD1 244 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 KRT80Q6KB66 452 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 KCTD18Q6PI47 426 aaPredicted RBP13.81□□□□□ -0.2
CLN6-216ENST00000636876 ARL9Q6T311 187 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 NUP37Q8NFH4 326 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 IPCEF1Q8WWN9 437 aaPredicted RBP13.81□□□□□ -0.2
CLN6-216ENST00000636876 AKAP1Q92667 903 aaKnown RBP eCLIP13.81□□□□□ -0.2
CLN6-216ENST00000636876 C4orf45Q96LM5 186 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 TTTY10Q9BZA0 68 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 Q9H521 79 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 PLCXD1Q9NUJ7 323 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 EIF3KQ9UBQ5 218 aaKnown RBP13.81□□□□□ -0.2
CLN6-216ENST00000636876 GRIP1Q9Y3R0 1128 aa13.81□□□□□ -0.2
CLN6-216ENST00000636876 A0A1W2PQL4 384 aaPredicted RBP13.8□□□□□ -0.2
CLN6-216ENST00000636876 E7EQL1 145 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 F5H5K5 113 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 M0R135 149 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 HS3ST1O14792 307 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 XPNPEP2O43895 674 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 FADS2O95864 444 aaKnown RBP13.8□□□□□ -0.2
CLN6-216ENST00000636876 FAM157BP0CG42 384 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 PRKXP51817 358 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 UCP2P55851 309 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 TPTEP56180 551 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 ACTC1P68032 377 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 ACTA1P68133 377 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 DEGS2Q6QHC5 323 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 ZNF322Q6U7Q0 402 aaPredicted RBP13.8□□□□□ -0.2
CLN6-216ENST00000636876 LRRN1Q6UXK5 716 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 RFPL4BQ6ZWI9 263 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 SSX6Q7RTT6 188 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 KRT77Q7Z794 578 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 ZNF101Q8IZC7 436 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 ACBD7Q8N6N7 88 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 OR52I1Q8NGK6 324 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 ZNF799Q96GE5 643 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 CNBD2Q96M20 576 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 OR8B4Q96RC9 309 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 KCNJ15Q99712 375 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 OR51B6Q9H340 312 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 PLEKHF2Q9H8W4 249 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 ELOVL3Q9HB03 270 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 FGF20Q9NP95 211 aaPredicted RBP13.8□□□□□ -0.2
CLN6-216ENST00000636876 TBCCD1Q9NVR7 557 aa13.8□□□□□ -0.2
CLN6-216ENST00000636876 SLCO1C1Q9NYB5 712 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms