RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 LHX2P50458 406 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 CCNHP51946 323 aaPredicted RBP0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 KPNA2P52292 529 aaKnown RBP0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 C21orf59P57076 290 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 DAOAP59103 153 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 MAXP61244 160 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 YWHAGP61981 247 aaKnown RBP eCLIP0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 TNNC1P63316 161 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 CCL7P80098 99 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 CYP24A1Q07973 514 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 NCBP1Q09161 790 aaKnown RBP0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 PDIA2Q13087 525 aaKnown RBP0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 PDZK1IP1Q13113 114 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 SCGB2A2Q13296 93 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 PNOCQ13519 176 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 FZD2Q14332 565 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 PDGFRLQ15198 375 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 DEFB109BQ30KR1 87 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 RFX4Q33E94 735 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 NSUN5P1Q3KNT7 163 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 TIGITQ495A1 244 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 ZBED5Q49AG3 693 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 PTPN20Q4JDL3 420 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 TMEM41BQ5BJD5 291 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 XKR4Q5GH76 650 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 DMRTC1Q5HYR2 192 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 PIP5KL1Q5T9C9 394 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 GPR157Q5UAW9 335 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 SYPL2Q5VXT5 272 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 LCN12Q6JVE5 192 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 CBLN3Q6UW01 205 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 ALKAL1Q6UXT8 129 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 IL34Q6ZMJ4 242 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF620Q6ZNG0 422 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 SHISA6Q6ZSJ9 500 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 UTS2BQ765I0 119 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 CCDC80Q76M96 950 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 C6orf120Q7Z4R8 191 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 ABHD12BQ7Z5M8 362 aaPredicted RBP0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 MOB3BQ86TA1 216 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 PAQR7Q86WK9 346 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 C17orf82Q86X59 251 aaPredicted RBP0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF573Q86YE8 665 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 PRSS58Q8IYP2 241 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC38A6Q8IZM9 456 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 TMEM61Q8N0U2 210 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 CLEC4FQ8N1N0 589 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF619Q8N2I2 560 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF561Q8N587 486 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 DHRSXQ8N5I4 330 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 CSGALNACT2Q8N6G5 542 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 NPWQ8N729 165 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 C15orf54Q8N8G6 183 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 ACOT4Q8N9L9 421 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 FNDC5Q8NAU1 212 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 MDS2Q8NDY4 140 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 OR4K14Q8NGD5 310 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 OR6C4Q8NGE1 309 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 OR10A7Q8NGE5 316 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 OR51S1Q8NGJ8 323 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 OR2T3Q8NH03 318 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 OR6X1Q8NH79 312 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 KIR2DL5BQ8NHK3 375 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 JOSD2Q8TAC2 188 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF461Q8TAF7 563 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 NANPQ8TBE9 248 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 SYNPRQ8TBG9 265 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC22A8Q8TCC7 542 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 DTX3LQ8TDB6 740 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 BRSK1Q8TDC3 778 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF721Q8TF20 911 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 DDI1Q8WTU0 396 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 CCDC12Q8WUD4 166 aaPredicted RBP0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 CT55Q8WUE5 264 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 STARD8Q92502 1023 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 THRSPQ92748 146 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 DNAJC19Q96DA6 116 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 C19orf60Q96EN9 201 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 CMTM7Q96FZ5 175 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 SMARCD1Q96GM5 515 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 SH3YL1Q96HL8 342 aaPredicted RBP0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 ANKRD36BP1Q96IX9 119 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC35E1Q96K37 410 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 CNDP1Q96KN2 507 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 C4orf36Q96KX1 117 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 IFT74Q96LB3 600 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 BMFQ96LC9 184 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 FOPNLQ96NB1 174 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 MTMR9Q96QG7 549 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 CLCC1Q96S66 551 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 PEBP4Q96S96 227 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 SECISBP2Q96T21 854 aaKnown RBP0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 HIST1H4GQ99525 98 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 GABRG3Q99928 467 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 CITED1Q99966 193 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 NRIP2Q9BQI9 281 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 C11orf70Q9BRQ4 267 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 TPPP3Q9BW30 176 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 SELENOIQ9C0D9 397 aa0.69□□□□□ -2.3
SMARCB1-209ENST00000635578 NEUROG2Q9H2A3 272 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms