RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 SAMD12Q8N8I0 201 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 ASB5Q8WWX0 329 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 FBXO17Q96EF6 278 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 GFI1Q99684 422 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 SH3GL3Q99963 347 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 CCDC32Q9BV29 185 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 DDX28Q9NUL7 540 aaKnown RBP18.88■□□□□ 0.61
SPAST-204ENST00000621856 ABRACLQ9P1F3 81 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 SLC5A6Q9Y289 635 aa18.88■□□□□ 0.61
SPAST-204ENST00000621856 PCDHGA9Q9Y5G4 932 aaKnown RBP18.88■□□□□ 0.61
SPAST-204ENST00000621856 AKAP13Q12802 2813 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 SLC22A20A6NK97 555 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 ANXA2P2A6NMY6 339 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 TTRP02766 147 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 MAS1P04201 325 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 ANXA2P07355 339 aaKnown RBP18.87■□□□□ 0.61
SPAST-204ENST00000621856 CST2P09228 141 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 SNRPBP14678 240 aaKnown RBP18.87■□□□□ 0.61
SPAST-204ENST00000621856 B4GALT1P15291 398 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 EVX1P49640 407 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 ZNF121P58317 390 aaPredicted RBP18.87■□□□□ 0.61
SPAST-204ENST00000621856 HIST1H3AP68431 136 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 GALK2Q01415 458 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 MADCAM1Q13477 382 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 ZNF79Q15937 498 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 CCDC92Q53HC0 331 aaPredicted RBP18.87■□□□□ 0.61
SPAST-204ENST00000621856 ELFN2Q5R3F8 820 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 HES5Q5TA89 166 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 HIST2H3PS2Q5TEC6 136 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 HIST2H3AQ71DI3 136 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 LRRTM1Q86UE6 522 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 OR8H2Q8N162 312 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 ZNF671Q8TAW3 534 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 KCNJ15Q99712 375 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 MALT1Q9UDY8 824 aa18.87■□□□□ 0.61
SPAST-204ENST00000621856 NUFIP1Q9UHK0 495 aaKnown RBP18.87■□□□□ 0.61
SPAST-204ENST00000621856 A0A0B4J203 849 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 OR6C65A6NJZ3 312 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 ACSM4P0C7M7 580 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 ELK1P19419 428 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 XKRXQ6PP77 449 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 LYSMD2Q8IV50 215 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 APH1AQ96BI3 265 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 SDHCQ99643 169 aaPredicted RBP18.86■□□□□ 0.61
SPAST-204ENST00000621856 SRRQ9GZT4 340 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 SLC7A10Q9NS82 523 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 PLEK2Q9NYT0 353 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 WASF3Q9UPY6 502 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 MSRB2Q9Y3D2 182 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 IFITM5A6NNB3 132 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 AIPO00170 330 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 SLC2A1P11166 492 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 ADRA2CP18825 462 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 PYDC2Q56P42 97 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 STEAP3Q658P3 488 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 P4HA3Q7Z4N8 544 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 LRRC28Q86X40 367 aaPredicted RBP18.86■□□□□ 0.61
SPAST-204ENST00000621856 SPACA3Q8IXA5 215 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 SLC22A24Q8N4F4 322 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 CKLFQ9UBR5 152 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 ZNF175Q9Y473 711 aa18.86■□□□□ 0.61
SPAST-204ENST00000621856 A0A1B0GVI7 797 aa18.85■□□□□ 0.61
SPAST-204ENST00000621856 AQP7O14520 342 aa18.85■□□□□ 0.61
SPAST-204ENST00000621856 SYT7O43581 403 aa18.85■□□□□ 0.61
SPAST-204ENST00000621856 TGM6O95932 706 aa18.85■□□□□ 0.61
SPAST-204ENST00000621856 FCGR2AP12318 317 aa18.85■□□□□ 0.61
SPAST-204ENST00000621856 SCRN3Q0VDG4 424 aa18.85■□□□□ 0.61
SPAST-204ENST00000621856 METAP1DQ6UB28 335 aaPredicted RBP18.85■□□□□ 0.61
SPAST-204ENST00000621856 ZNF813Q6ZN06 617 aa18.85■□□□□ 0.61
SPAST-204ENST00000621856 FAM57BQ71RH2 274 aa18.85■□□□□ 0.61
SPAST-204ENST00000621856 ZNF100Q8IYN0 542 aa18.85■□□□□ 0.61
SPAST-204ENST00000621856 DNAAF1Q8NEP3 725 aa18.85■□□□□ 0.61
SPAST-204ENST00000621856 OR5H6Q8NGV6 325 aa18.85■□□□□ 0.61
SPAST-204ENST00000621856 PRDM14Q9GZV8 571 aa18.85■□□□□ 0.61
SPAST-204ENST00000621856 EXTL2Q9UBQ6 330 aa18.85■□□□□ 0.61
SPAST-204ENST00000621856 UPB1Q9UBR1 384 aa18.85■□□□□ 0.61
SPAST-204ENST00000621856 A0A1B0GVC2 190 aa18.84■□□□□ 0.61
SPAST-204ENST00000621856 ISPDA4D126 451 aa18.84■□□□□ 0.61
SPAST-204ENST00000621856 ZNF587BE7ETH6 402 aa18.84■□□□□ 0.61
SPAST-204ENST00000621856 EIF4EP06730 217 aaKnown RBP18.84■□□□□ 0.61
SPAST-204ENST00000621856 CTSSP25774 331 aa18.84■□□□□ 0.61
SPAST-204ENST00000621856 TALDO1P37837 337 aa18.84■□□□□ 0.61
SPAST-204ENST00000621856 PSMD7P51665 324 aa18.84■□□□□ 0.61
SPAST-204ENST00000621856 IL18Q14116 193 aa18.84■□□□□ 0.61
SPAST-204ENST00000621856 NUFIP2Q7Z417 695 aaKnown RBP18.84■□□□□ 0.61
SPAST-204ENST00000621856 COMMD2Q86X83 199 aa18.84■□□□□ 0.61
SPAST-204ENST00000621856 CENPSQ8N2Z9 138 aa18.84■□□□□ 0.61
SPAST-204ENST00000621856 OR8B12Q8NGG6 310 aa18.84■□□□□ 0.61
SPAST-204ENST00000621856 CHPT1Q8WUD6 406 aa18.84■□□□□ 0.61
SPAST-204ENST00000621856 C14orf119Q9NWQ9 140 aa18.84■□□□□ 0.61
SPAST-204ENST00000621856 TAS2R4Q9NYW5 299 aa18.84■□□□□ 0.61
SPAST-204ENST00000621856 CELSR3Q9NYQ7 3312 aa18.84■□□□□ 0.61
SPAST-204ENST00000621856 F5H5K5 113 aa18.83■□□□□ 0.61
SPAST-204ENST00000621856 MKRN2OSH3BPM6 223 aa18.83■□□□□ 0.61
SPAST-204ENST00000621856 SGCEO43556 437 aa18.83■□□□□ 0.61
SPAST-204ENST00000621856 FARS2O95363 451 aaKnown RBP18.83■□□□□ 0.61
SPAST-204ENST00000621856 SLC6A9P48067 706 aa18.83■□□□□ 0.61
SPAST-204ENST00000621856 RAB35Q15286 201 aa18.83■□□□□ 0.61
SPAST-204ENST00000621856 TRIM16LQ309B1 348 aa18.83■□□□□ 0.61
SPAST-204ENST00000621856 SLC16A14Q7RTX9 510 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms