RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 MRGPRX4Q96LA9 322 aa19.05■□□□□ 0.64
SGMS1-210ENST00000619438 TRIB1Q96RU8 372 aa19.05■□□□□ 0.64
SGMS1-210ENST00000619438 CHST11Q9NPF2 352 aa19.05■□□□□ 0.64
SGMS1-210ENST00000619438 NCOA6Q14686 2063 aaPredicted RBP19.04■□□□□ 0.64
SGMS1-210ENST00000619438 A0A1W2PPK0 400 aa19.04■□□□□ 0.64
SGMS1-210ENST00000619438 TMEM212A6NML5 194 aa19.04■□□□□ 0.64
SGMS1-210ENST00000619438 OR4C45A6NMZ5 311 aa19.04■□□□□ 0.64
SGMS1-210ENST00000619438 PSMD9O00233 223 aa19.04■□□□□ 0.64
SGMS1-210ENST00000619438 UBL3O95164 117 aa19.04■□□□□ 0.64
SGMS1-210ENST00000619438 RAF1P04049 648 aa19.04■□□□□ 0.64
SGMS1-210ENST00000619438 CPN1P15169 458 aa19.04■□□□□ 0.64
SGMS1-210ENST00000619438 CRABP1P29762 137 aa19.04■□□□□ 0.64
SGMS1-210ENST00000619438 INPP1P49441 399 aa19.04■□□□□ 0.64
SGMS1-210ENST00000619438 ROM1Q03395 351 aa19.04■□□□□ 0.64
SGMS1-210ENST00000619438 PUDPQ08623 228 aa19.04■□□□□ 0.64
SGMS1-210ENST00000619438 RASGEF1BQ0VAM2 473 aa19.04■□□□□ 0.64
SGMS1-210ENST00000619438 MADCAM1Q13477 382 aa19.04■□□□□ 0.64
SGMS1-210ENST00000619438 H1FNTQ75WM6 255 aaPredicted RBP19.04■□□□□ 0.64
SGMS1-210ENST00000619438 OR2G2Q8NGZ5 317 aa19.04■□□□□ 0.64
SGMS1-210ENST00000619438 HSD17B8Q92506 261 aa19.04■□□□□ 0.64
SGMS1-210ENST00000619438 MMP28Q9H239 520 aa19.04■□□□□ 0.64
SGMS1-210ENST00000619438 VDAC3Q9Y277 283 aa19.04■□□□□ 0.64
SGMS1-210ENST00000619438 HMX3A6NHT5 357 aa19.03■□□□□ 0.64
SGMS1-210ENST00000619438 MS4A18H0YCH9 400 aa19.03■□□□□ 0.64
SGMS1-210ENST00000619438 AIPO00170 330 aa19.03■□□□□ 0.64
SGMS1-210ENST00000619438 CCNKO75909 580 aa19.03■□□□□ 0.64
SGMS1-210ENST00000619438 DAP3P51398 398 aaKnown RBP19.03■□□□□ 0.64
SGMS1-210ENST00000619438 PITPNAQ00169 270 aa19.03■□□□□ 0.64
SGMS1-210ENST00000619438 CDSNQ15517 529 aa19.03■□□□□ 0.64
SGMS1-210ENST00000619438 MS4A18Q3C1V0 323 aa19.03■□□□□ 0.64
SGMS1-210ENST00000619438 ACSF3Q4G176 576 aaPredicted RBP19.03■□□□□ 0.64
SGMS1-210ENST00000619438 PLET1Q6UQ28 207 aa19.03■□□□□ 0.64
SGMS1-210ENST00000619438 CHMP1BQ7LBR1 199 aa19.03■□□□□ 0.64
SGMS1-210ENST00000619438 OR5M1Q8NGP8 315 aa19.03■□□□□ 0.64
SGMS1-210ENST00000619438 OR5H6Q8NGV6 325 aa19.03■□□□□ 0.64
SGMS1-210ENST00000619438 OR6F1Q8NGZ6 308 aa19.03■□□□□ 0.64
SGMS1-210ENST00000619438 RFT1Q96AA3 541 aa19.03■□□□□ 0.64
SGMS1-210ENST00000619438 OR8B4Q96RC9 309 aa19.03■□□□□ 0.64
SGMS1-210ENST00000619438 PIGQQ9BRB3 760 aa19.03■□□□□ 0.64
SGMS1-210ENST00000619438 THAP7Q9BT49 309 aaPredicted RBP19.03■□□□□ 0.64
SGMS1-210ENST00000619438 IKZF2Q9UKS7 526 aa19.03■□□□□ 0.64
SGMS1-210ENST00000619438 AK6Q9Y3D8 172 aaKnown RBP19.03■□□□□ 0.64
SGMS1-210ENST00000619438 ITPR2Q14571 2701 aa19.03■□□□□ 0.64
SGMS1-210ENST00000619438 ZNF254O75437 659 aa19.02■□□□□ 0.64
SGMS1-210ENST00000619438 RPP14O95059 124 aaKnown RBP19.02■□□□□ 0.64
SGMS1-210ENST00000619438 PLGP00747 810 aaPredicted RBP19.02■□□□□ 0.64
SGMS1-210ENST00000619438 CCR9P51686 369 aa19.02■□□□□ 0.64
SGMS1-210ENST00000619438 ZNF454Q8N9F8 522 aa19.02■□□□□ 0.64
SGMS1-210ENST00000619438 LILRB4Q8NHJ6 448 aa19.02■□□□□ 0.64
SGMS1-210ENST00000619438 GFI1Q99684 422 aa19.02■□□□□ 0.64
SGMS1-210ENST00000619438 BRD7Q9NPI1 651 aa19.02■□□□□ 0.64
SGMS1-210ENST00000619438 TRBV5-7A0A0A0MS05 114 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 ACOD1A6NK06 481 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 IFITM5A6NNB3 132 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 ZNF593O00488 134 aaPredicted RBP19.01■□□□□ 0.63
SGMS1-210ENST00000619438 CTDSPLO15194 276 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 SLC16A7O60669 478 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 IL2RAP01589 272 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 SNRPBP14678 240 aaKnown RBP19.01■□□□□ 0.63
SGMS1-210ENST00000619438 MMP15P51511 669 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 ZNF41P51814 821 aaPredicted RBP19.01■□□□□ 0.63
SGMS1-210ENST00000619438 FOXF1Q12946 379 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 UBE2NLQ5JXB2 153 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 SLC18B1Q6NT16 456 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 ARSKQ6UWY0 536 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 SYT9Q86SS6 491 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 THEM6Q8WUY1 208 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 ASB10Q8WXI3 467 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 NSMAFQ92636 917 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 ABHD1Q96SE0 405 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 NPAS1Q99742 590 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 COMMD4Q9H0A8 199 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 SLITRK2Q9H156 845 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 KCNJ16Q9NPI9 418 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 MRPL22Q9NWU5 206 aaKnown RBP19.01■□□□□ 0.63
SGMS1-210ENST00000619438 KCNG2Q9UJ96 466 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 TEX15Q9BXT5 2789 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 A0A0G2JNJ9 132 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 FAM90A27PA6NNH2 459 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 LINC01387J3KSC0 135 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 SLC43A1O75387 559 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 CTLA4P16410 223 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 POU3F2P20265 443 aaPredicted RBP19.01■□□□□ 0.63
SGMS1-210ENST00000619438 HLA-DMAP28067 261 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 GRNP28799 593 aaKnown RBP19.01■□□□□ 0.63
SGMS1-210ENST00000619438 DDOSTP39656 456 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 LHX2P50458 406 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 CLDN20P56880 219 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 SLC17A1Q14916 467 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 PLPPR5Q32ZL2 321 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 TEX30Q5JUR7 227 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 RIPPLY2Q5TAB7 128 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 ZNF787Q6DD87 383 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 DNM1P34Q6PK57 102 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 ZNF679Q8IYX0 411 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 ADPRHL1Q8NDY3 354 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 DNAJA3Q96EY1 480 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 ARL5BQ96KC2 179 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 C4orf45Q96LM5 186 aa19.01■□□□□ 0.63
SGMS1-210ENST00000619438 MARVELD1Q9BSK0 173 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms