RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 TNFRSF14Q92956 283 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 MOGAT1Q96PD6 335 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 CPPED1Q9BRF8 314 aaPredicted RBP3.73□□□□□ -1.81
SNCA-213ENST00000618500 TMEM38AQ9H6F2 299 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 AIG1Q9NVV5 245 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 IGHV3OR16-10A0A075B7F0 116 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 A0A1W2PRG6 482 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 A6NIZ1 184 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 F2RL2O00254 374 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 GMDSO60547 372 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 PEX11AO75192 247 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 THY1P04216 161 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 IL6P05231 212 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 NQO1P15559 274 aaKnown RBP3.73□□□□□ -1.81
SNCA-213ENST00000618500 PPIBP23284 216 aaKnown RBP3.73□□□□□ -1.81
SNCA-213ENST00000618500 S100A3P33764 101 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 PMELP40967 661 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 RAP1BP61224 184 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 RAP1AP62834 184 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 NPTX1Q15818 432 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 HHATQ5VTY9 493 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 KDM8Q8N371 416 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 LINC00482Q8N8I6 264 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 Q8NFD4 153 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 LHX4Q969G2 390 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 TMEM19Q96HH6 336 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 APOPT1Q96IL0 206 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 CLPTM1LQ96KA5 538 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 ECSITQ9BQ95 431 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 EMC6Q9BV81 110 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 TLNRD1Q9H1K6 362 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 POFUT1Q9H488 388 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 OPA3Q9H6K4 179 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 MEAF6Q9HAF1 191 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 TMEM27Q9HBJ8 222 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 OOEPA6NGQ2 149 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 H0YHG0 523 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 MLNRO43193 412 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 MUC1P15941 1255 aaPredicted RBP3.73□□□□□ -1.81
SNCA-213ENST00000618500 MSR1P21757 451 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 ALDH3A1P30838 453 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 CRATP43155 626 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 LSM6P62312 80 aaKnown RBP3.73□□□□□ -1.81
SNCA-213ENST00000618500 OR1Q1Q15612 314 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 C8orf74Q6P047 294 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 SLC2A7Q6PXP3 512 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 FOXRED1Q96CU9 486 aaPredicted RBP3.73□□□□□ -1.81
SNCA-213ENST00000618500 PCGF1Q9BSM1 259 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 C1orf50Q9BV19 199 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 SRA1Q9HD15 236 aaKnown RBP3.73□□□□□ -1.81
SNCA-213ENST00000618500 RLIMQ9NVW2 624 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 RNF7Q9UBF6 113 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 CORO2BQ9UQ03 480 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 FAM96BQ9Y3D0 163 aa3.73□□□□□ -1.81
SNCA-213ENST00000618500 TSSC4Q9Y5U2 329 aaPredicted RBP3.73□□□□□ -1.81
SNCA-213ENST00000618500 A6NDX4 124 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 OR6A2O95222 327 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 RBP4P02753 201 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 AQP5P55064 265 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 DGCR2P98153 550 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 AQP6Q13520 282 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 RABL3Q5HYI8 236 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 LYPD2Q6UXB3 125 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 CCBE1Q6UXH8 406 aaPredicted RBP3.72□□□□□ -1.81
SNCA-213ENST00000618500 KRT74Q7RTS7 529 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 KRT73Q86Y46 540 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 Q8N7P7 452 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 APOBEC3DQ96AK3 386 aaPredicted RBP3.72□□□□□ -1.81
SNCA-213ENST00000618500 CMBLQ96DG6 245 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 DCTN5Q9BTE1 182 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 TXNIPQ9H3M7 391 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 MSL2Q9HCI7 577 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 FOXJ3Q9UPW0 622 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 TBL2Q9Y4P3 447 aaKnown RBP3.72□□□□□ -1.81
SNCA-213ENST00000618500 TRBV23-1A0A0A0MS06 115 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 ANKRD61A6NGH8 418 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 FAM90A8PA6NJQ4 464 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.72□□□□□ -1.81
SNCA-213ENST00000618500 COPEO14579 308 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 FAM20BO75063 409 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 OR7A10O76100 309 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 CLIC3O95833 236 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 CYB5R3P00387 301 aaPredicted RBP3.72□□□□□ -1.81
SNCA-213ENST00000618500 IGHA1P01876 353 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 PRB2P02812 416 aaPredicted RBP3.72□□□□□ -1.81
SNCA-213ENST00000618500 BCHEP06276 602 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 PATE4P0C8F1 98 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 CD28P10747 220 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 CCL2P13500 99 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 SNRPBP14678 240 aaKnown RBP3.72□□□□□ -1.81
SNCA-213ENST00000618500 IGLL1P15814 213 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 ZNF26P17031 533 aaPredicted RBP3.72□□□□□ -1.81
SNCA-213ENST00000618500 LMO1P25800 156 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 TGM4P49221 684 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 GNG11P61952 73 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 SPANXN4Q5MJ08 99 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 LRIF1Q5T3J3 769 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 ATG16L1Q676U5 607 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 CALHM1Q8IU99 346 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 CLEC4FQ8N1N0 589 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms