RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 HSPB2Q16082 182 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 OR6M1Q8NGM8 313 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 FRZBQ92765 325 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 CPNE4Q96A23 557 aaPredicted RBP12.51□□□□□ -0.41
CIITA-213ENST00000618327 MFRPQ9BY79 579 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 LSM5Q9Y4Y9 91 aaKnown RBP12.51□□□□□ -0.41
CIITA-213ENST00000618327 TIMM10BQ9Y5J6 103 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 CNOT1A5YKK6 2376 aaKnown RBP12.51□□□□□ -0.41
CIITA-213ENST00000618327 CKAP5Q14008 2032 aa12.51□□□□□ -0.41
CIITA-213ENST00000618327 SPAARA0A1B0GVQ0 90 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 A0A1W2PQM1 296 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 C21orf140B9A014 251 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 TGM6O95932 706 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 FZD5Q13467 585 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 B3GNTL1Q67FW5 361 aaPredicted RBP12.5□□□□□ -0.41
CIITA-213ENST00000618327 LCN10Q6JVE6 187 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 FAM122CQ6P4D5 195 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 ATG4DQ86TL0 474 aaPredicted RBP12.5□□□□□ -0.41
CIITA-213ENST00000618327 RDH10Q8IZV5 341 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 KCNG3Q8TAE7 436 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 FAM3DQ96BQ1 224 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 C19orf12Q9NSK7 152 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 ETV7Q9Y603 341 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 TRAPPC2LH3BP13 241 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 SKP2Q13309 424 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 GPR176Q14439 515 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 SLC23A3Q6PIS1 610 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 Q6ZNX1 250 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 SVBPQ8N300 66 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 FAM181AQ8N9Y4 354 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 OR13C5Q8NGS8 318 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 APH1BQ8WW43 257 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 INTS12Q96CB8 462 aaKnown RBP12.5□□□□□ -0.41
CIITA-213ENST00000618327 LHX6Q9UPM6 363 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 RCE1Q9Y256 329 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 CACNA1IQ9P0X4 2223 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 ANKRD36A6QL64 1941 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 TSC2P49815 1807 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 OR6C68A6NDL8 312 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 GAAP10253 952 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 HLA-DMAP28067 261 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 BCL2A1Q16548 175 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 OR6V1Q8N148 313 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 GALNT16Q8N428 558 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 NOXO1Q8NFA2 376 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 MALSU1Q96EH3 234 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 LIN37Q96GY3 246 aaPredicted RBP12.5□□□□□ -0.41
CIITA-213ENST00000618327 ABHD6Q9BV23 337 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 MOB1AQ9H8S9 216 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 SLCO1C1Q9NYB5 712 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 TRAV17A0A0B4J275 112 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 OIP5O43482 229 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 HYAL3O43820 417 aaPredicted RBP12.5□□□□□ -0.41
CIITA-213ENST00000618327 GCM2O75603 506 aaPredicted RBP12.5□□□□□ -0.41
CIITA-213ENST00000618327 VEGFCP49767 419 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 FAPQ12884 760 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 DOK3Q7L591 496 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 OR51E1Q8TCB6 317 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 TOMM40LQ969M1 308 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 SIGLEC11Q96RL6 698 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 DNTTIP1Q9H147 329 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 NELFAQ9H3P2 528 aa12.5□□□□□ -0.41
CIITA-213ENST00000618327 POM121CA8CG34 1229 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 KRBOX1C9JBD0 128 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 MT-ND4P03905 459 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 MZT1Q08AG7 82 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 AQP6Q13520 282 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 STEAP3Q658P3 488 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 ZNF546Q86UE3 836 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 C12orf45Q8N5I9 185 aaPredicted RBP12.49□□□□□ -0.41
CIITA-213ENST00000618327 OR56B1Q8NGI3 324 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 IGKV1D-16P01601 117 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 ZNF136P52737 540 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 LSM11P83369 360 aaKnown RBP eCLIP12.49□□□□□ -0.41
CIITA-213ENST00000618327 ZNF766Q5HY98 468 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 OR11G2Q8NGC1 345 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 TRIB1Q96RU8 372 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 SPIN2AQ99865 258 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 SPIN2BQ9BPZ2 258 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 NOX3Q9HBY0 568 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 PIGLQ9Y2B2 252 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 ZNF891A8MT65 544 aaPredicted RBP12.49□□□□□ -0.41
CIITA-213ENST00000618327 M0R135 149 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 FOSL1P15407 271 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 SRD5A2P31213 254 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 CXADRP78310 365 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 VASH2Q86V25 355 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 OR2G2Q8NGZ5 317 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 PAQR8Q8TEZ7 354 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 ZNF799Q96GE5 643 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 DCLRE1CQ96SD1 692 aaKnown RBP12.49□□□□□ -0.41
CIITA-213ENST00000618327 LANCL2Q9NS86 450 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 CGGBP1Q9UFW8 167 aaPredicted RBP12.49□□□□□ -0.41
CIITA-213ENST00000618327 SLC22A13Q9Y226 551 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 ZNF44P15621 663 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 TAS2R31P59538 309 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 TAS2R19P59542 299 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 IL13RA1P78552 427 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 FUT5Q11128 374 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 MEF2DQ14814 521 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms