RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 RBM34P42696 430 aaKnown RBP11.86□□□□□ -0.51
MSH6-214ENST00000616033 TGIF2LXQ8IUE1 241 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 OR51F2Q8NH61 342 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 CD300LFQ8TDQ1 290 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 RNF141Q8WVD5 230 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 KTI12Q96EK9 354 aaPredicted RBP11.86□□□□□ -0.51
MSH6-214ENST00000616033 ZNF764Q96H86 408 aaPredicted RBP11.86□□□□□ -0.51
MSH6-214ENST00000616033 SULT4A1Q9BR01 284 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 EMC9Q9Y3B6 208 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 XKRYO14609 159 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 EFEMP2O95967 443 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 PSMB6P28072 239 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 ADPRHP54922 357 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 MFGE8Q08431 387 aaPredicted RBP11.86□□□□□ -0.51
MSH6-214ENST00000616033 ZNF616Q08AN1 781 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 ADAMTSL4Q6UY14 1074 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 COX15Q7KZN9 410 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 PPP1R3BQ86XI6 285 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 PRSS58Q8IYP2 241 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 OR13C3Q8NGS6 347 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 GPX8Q8TED1 209 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 FAM3CQ92520 227 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 SERINC2Q96SA4 455 aa11.86□□□□□ -0.51
MSH6-214ENST00000616033 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.86□□□□□ -0.51
MSH6-214ENST00000616033 CEACAM5P06731 702 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 EN2P19622 333 aaPredicted RBP11.85□□□□□ -0.51
MSH6-214ENST00000616033 RPL18Q07020 188 aaKnown RBP11.85□□□□□ -0.51
MSH6-214ENST00000616033 ZNF765Q7L2R6 523 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 ZNF101Q8IZC7 436 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 ST7LQ8TDW4 575 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 PMM1Q92871 262 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 RNF166Q96A37 237 aaPredicted RBP11.85□□□□□ -0.51
MSH6-214ENST00000616033 CMTM3Q96MX0 182 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 GAL3ST4Q96RP7 486 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 CFAP54Q96N23 3096 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 PQLC2LA1A4F0 135 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 C9orf170A2RU37 121 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 SDCBPO00560 298 aaPredicted RBP11.85□□□□□ -0.51
MSH6-214ENST00000616033 TERTO14746 1132 aaKnown RBP11.85□□□□□ -0.51
MSH6-214ENST00000616033 RENP00797 406 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 KNG1P01042 644 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 IFNA4P05014 189 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 DRD3P35462 400 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 LBX1P52954 281 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 BTG2P78543 158 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 MPPED2Q15777 294 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 PRICKLE4Q2TBC4 344 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 C7orf61Q8IZ16 206 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 CCDC54Q8NEL0 328 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 OR13C9Q8NGT0 318 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 LPAR4Q99677 370 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 IGFLR1Q9H665 355 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.85□□□□□ -0.51
MSH6-214ENST00000616033 WBP1LQ9NX94 342 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 COLEC10Q9Y6Z7 277 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 KIAA1549LQ6ZVL6 1849 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 A0A1W2PPH5 198 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 TCAPO15273 167 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 CD14P08571 375 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 SMIM6P0DI80 62 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 ABCD3P28288 659 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 RPS15AP62244 130 aaKnown RBP11.85□□□□□ -0.51
MSH6-214ENST00000616033 HABP2Q14520 560 aaPredicted RBP11.85□□□□□ -0.51
MSH6-214ENST00000616033 FAM24BQ8N5W8 94 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 OR2I1PQ8NGU4 316 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 PHYHIPQ92561 330 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 PIK3IP1Q96FE7 263 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 TGM7Q96PF1 710 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 SLC25A21Q9BQT8 299 aaPredicted RBP11.85□□□□□ -0.51
MSH6-214ENST00000616033 UTP23Q9BRU9 249 aaKnown RBP11.85□□□□□ -0.51
MSH6-214ENST00000616033 NRSN2Q9GZP1 204 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 OR5AC2Q9NZP5 309 aa11.85□□□□□ -0.51
MSH6-214ENST00000616033 THEGLP0DJG4 465 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 NR0B1P51843 470 aaKnown RBP11.84□□□□□ -0.51
MSH6-214ENST00000616033 NFATC4Q14934 902 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 CDCP2Q5VXM1 449 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 LYG2Q86SG7 212 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 TOX2Q96NM4 488 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 IP6K3Q96PC2 410 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 SMOC1Q9H4F8 434 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 PISDQ9UG56 409 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 TMEM212A6NML5 194 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 C9JQL5 133 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 SLC17A2O00624 439 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 MAOAP21397 527 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 ZP2Q05996 745 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 MESTQ5EB52 335 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 RPL7L1Q6DKI1 246 aaKnown RBP11.84□□□□□ -0.51
MSH6-214ENST00000616033 TMEM225Q6GV28 225 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 ZSCAN4Q8NAM6 433 aaPredicted RBP11.84□□□□□ -0.51
MSH6-214ENST00000616033 CAMKVQ8NCB2 501 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 METTL21AQ8WXB1 218 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 C4orf45Q96LM5 186 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 DCBLD2Q96PD2 775 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 CFHR5Q9BXR6 569 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 EIF5A2Q9GZV4 153 aaKnown RBP11.84□□□□□ -0.51
MSH6-214ENST00000616033 ZBP1Q9H171 429 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 AMDHD2Q9Y303 409 aa11.84□□□□□ -0.51
MSH6-214ENST00000616033 RNASEK-C17orf49H0YIS7 233 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms