RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 PLEKHB1Q9UF11 243 aaPredicted RBP17.16■□□□□ 0.34
SPAST-203ENST00000615843 GDF2Q9UK05 429 aaPredicted RBP17.16■□□□□ 0.34
SPAST-203ENST00000615843 EIF4E2O60573 245 aaKnown RBP17.16■□□□□ 0.34
SPAST-203ENST00000615843 CDK5Q00535 292 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 SLC38A6Q8IZM9 456 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 PIGQQ9BRB3 760 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 C12orf10Q9HB07 376 aa17.16■□□□□ 0.34
SPAST-203ENST00000615843 SIGLEC6O43699 453 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 SSSCA1O60232 199 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 LIMS3P0CW19 117 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 LIMS4P0CW20 117 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 RPL18Q07020 188 aaKnown RBP17.15■□□□□ 0.34
SPAST-203ENST00000615843 SLC17A1Q14916 467 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 MANEAQ5SRI9 462 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 CAMKMTQ7Z624 323 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 GOT1L1Q8NHS2 421 aaPredicted RBP17.15■□□□□ 0.34
SPAST-203ENST00000615843 SPACA5Q96QH8 159 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 DNMT3BQ9UBC3 853 aaKnown RBP17.15■□□□□ 0.34
SPAST-203ENST00000615843 V9GYS6 101 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 SDHBP21912 280 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 FABP9Q0Z7S8 132 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 ASTLQ6HA08 431 aaPredicted RBP17.15■□□□□ 0.34
SPAST-203ENST00000615843 SEMA6DQ8NFY4 1073 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 LIPHQ8WWY8 451 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 SMIM7Q9BQ49 75 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 OPA3Q9H6K4 179 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 HEYLQ9NQ87 328 aaPredicted RBP17.15■□□□□ 0.34
SPAST-203ENST00000615843 GNG12Q9UBI6 72 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 V9GYH0 126 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 KIR2DS1A0A191URI9 304 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 BTBD17A6NE02 478 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 G0S2P27469 103 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 KIR2DS4P43632 304 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 TGFBR3Q03167 851 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 MZT1Q08AG7 82 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 KIR2DS1Q14954 304 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 ZNF787Q6DD87 383 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 OR10D4PQ8NGN7 298 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 OR4F5Q8NH21 305 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 LHX4Q969G2 390 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 OR4F4Q96R69 305 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 SUSD2Q9UGT4 822 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 FOXJ3Q9UPW0 622 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 UPK1AO00322 258 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 IGLV3-27P01718 113 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 PTHLHP12272 177 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 DEFB103AP81534 67 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 TOE1Q96GM8 510 aaKnown RBP17.15■□□□□ 0.34
SPAST-203ENST00000615843 SIGLEC11Q96RL6 698 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 TINAGL1Q9GZM7 467 aaPredicted RBP17.15■□□□□ 0.34
SPAST-203ENST00000615843 IL20Q9NYY1 176 aa17.15■□□□□ 0.34
SPAST-203ENST00000615843 ZMAT5Q9UDW3 170 aaKnown RBP17.15■□□□□ 0.34
SPAST-203ENST00000615843 F6UZH7 168 aa17.14■□□□□ 0.34
SPAST-203ENST00000615843 GLSO94925 669 aaPredicted RBP17.14■□□□□ 0.34
SPAST-203ENST00000615843 NPBWR1P48145 328 aa17.14■□□□□ 0.34
SPAST-203ENST00000615843 MVDP53602 400 aa17.14■□□□□ 0.34
SPAST-203ENST00000615843 PRAMEF20Q5VT98 475 aa17.14■□□□□ 0.34
SPAST-203ENST00000615843 KIR3DX1Q9H7L2 352 aa17.14■□□□□ 0.34
SPAST-203ENST00000615843 MOB1AQ9H8S9 216 aa17.14■□□□□ 0.34
SPAST-203ENST00000615843 ZNF331Q9NQX6 463 aaPredicted RBP17.14■□□□□ 0.34
SPAST-203ENST00000615843 CREBZFQ9NS37 354 aa17.14■□□□□ 0.34
SPAST-203ENST00000615843 ZNF586Q9NXT0 402 aa17.14■□□□□ 0.34
SPAST-203ENST00000615843 RNF150Q9ULK6 438 aa17.14■□□□□ 0.34
SPAST-203ENST00000615843 MMACHCQ9Y4U1 282 aa17.14■□□□□ 0.34
SPAST-203ENST00000615843 N4BP2Q86UW6 1770 aaPredicted RBP17.14■□□□□ 0.34
SPAST-203ENST00000615843 SLC6A1P30531 599 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 ZNF90Q03938 601 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 TMEM268Q5VZI3 342 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 MUC20Q8N307 709 aaPredicted RBP17.14■□□□□ 0.33
SPAST-203ENST00000615843 SCMH1Q96GD3 660 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 KCNJ15Q99712 375 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 KCNG2Q9UJ96 466 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 FGF17O60258 216 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 CORO6Q6QEF8 472 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 BTNL8Q6UX41 500 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 C9orf62Q8N4C0 152 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 COMMD1Q8N668 190 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 EDAQ92838 391 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 ZNF816-ZNF321PA0A0X1KG74 233 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 SLC17A2O00624 439 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 GJA4P35212 333 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 YPEL5P62699 121 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 GUK1Q16774 197 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 TMEM128Q5BJH2 165 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 ZNF321PQ8N8H1 164 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 SEMA6CQ9H3T2 930 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 CTSFQ9UBX1 484 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 MAST2Q6P0Q8 1798 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 AKR7A3O95154 331 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 FABP4P15090 132 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 FGF7P21781 194 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 SLC16A13Q7RTY0 426 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 EMC6Q9BV81 110 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 NRSN2Q9GZP1 204 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 LRIT1Q9P2V4 623 aa17.14■□□□□ 0.33
SPAST-203ENST00000615843 XRCC2O43543 280 aa17.13■□□□□ 0.33
SPAST-203ENST00000615843 WNT3P56703 355 aa17.13■□□□□ 0.33
SPAST-203ENST00000615843 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.13■□□□□ 0.33
SPAST-203ENST00000615843 PRTGQ2VWP7 1150 aa17.13■□□□□ 0.33
SPAST-203ENST00000615843 PLXDC2Q6UX71 529 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms