RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 C1orf174Q8IYL3 243 aa14.28□□□□□ -0.12
IRF1-211ENST00000613424 LRRC75A-AS1Q8N1F1 130 aa14.28□□□□□ -0.12
IRF1-211ENST00000613424 OR8J1Q8NGP2 316 aa14.28□□□□□ -0.12
IRF1-211ENST00000613424 ABHD4Q8TB40 342 aa14.28□□□□□ -0.12
IRF1-211ENST00000613424 FAM81AQ8TBF8 368 aa14.28□□□□□ -0.12
IRF1-211ENST00000613424 ST7LQ8TDW4 575 aa14.28□□□□□ -0.12
IRF1-211ENST00000613424 TRUB1Q8WWH5 349 aaKnown RBP14.28□□□□□ -0.12
IRF1-211ENST00000613424 PERPQ96FX8 193 aa14.28□□□□□ -0.12
IRF1-211ENST00000613424 DCLRE1CQ96SD1 692 aaKnown RBP14.28□□□□□ -0.12
IRF1-211ENST00000613424 ATF6BQ99941 703 aa14.28□□□□□ -0.12
IRF1-211ENST00000613424 CACNG6Q9BXT2 260 aa14.28□□□□□ -0.12
IRF1-211ENST00000613424 GSX2Q9BZM3 304 aa14.28□□□□□ -0.12
IRF1-211ENST00000613424 CXXC4Q9H2H0 198 aa14.28□□□□□ -0.12
IRF1-211ENST00000613424 TBCCD1Q9NVR7 557 aa14.28□□□□□ -0.12
IRF1-211ENST00000613424 NKX1-2Q9UD57 310 aaPredicted RBP14.28□□□□□ -0.12
IRF1-211ENST00000613424 DUSP13Q9UII6 198 aa14.28□□□□□ -0.12
IRF1-211ENST00000613424 PMF1-BGLAPU3KQ54 211 aa14.28□□□□□ -0.12
IRF1-211ENST00000613424 F5H5K5 113 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 DLGAP1O14490 977 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 CASQ2O14958 399 aaPredicted RBP14.27□□□□□ -0.13
IRF1-211ENST00000613424 BMP4P12644 408 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 ZNF250P15622 560 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 PPP1CBP62140 327 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 TESK1Q15569 626 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 SPATA46Q5T0L3 261 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 LCN1P1Q5VSP4 162 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 RFPL4BQ6ZWI9 263 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 SYNPRQ8TBG9 265 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 SLC25A40Q8TBP6 338 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 SLAMF6Q96DU3 332 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 TRMT61AQ96FX7 289 aaKnown RBP14.27□□□□□ -0.13
IRF1-211ENST00000613424 MARS2Q96GW9 593 aaKnown RBP14.27□□□□□ -0.13
IRF1-211ENST00000613424 SYT3Q9BQG1 590 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 ABHD6Q9BV23 337 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 C8orf4Q9NR00 106 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 CENPMQ9NSP4 180 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 DDX28Q9NUL7 540 aaKnown RBP14.27□□□□□ -0.13
IRF1-211ENST00000613424 FAM118AQ9NWS6 357 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 GMPPBQ9Y5P6 360 aa14.27□□□□□ -0.13
IRF1-211ENST00000613424 MYO9AB2RTY4 2548 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 CREBBPQ92793 2442 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 ARID1AO14497 2285 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 PRRC2AP48634 2157 aaKnown RBP14.26□□□□□ -0.13
IRF1-211ENST00000613424 LOC100130705A0A1B0GUX0 176 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 SLC22A31A6NKX4 558 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 CLPTM1O96005 669 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 NAA10P41227 235 aaPredicted RBP14.26□□□□□ -0.13
IRF1-211ENST00000613424 HCCSP53701 268 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 ATP5J2P56134 94 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 SNRPD2P62316 118 aaKnown RBP14.26□□□□□ -0.13
IRF1-211ENST00000613424 ZNF718Q3SXZ3 478 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 OGFRL1Q5TC84 451 aaPredicted RBP14.26□□□□□ -0.13
IRF1-211ENST00000613424 SLC16A9Q7RTY1 509 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 NAA40Q86UY6 237 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 GID4Q8IVV7 300 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 PACRGLQ8N7B6 248 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 OTOSQ8NHW6 89 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 KLF14Q8TD94 323 aaPredicted RBP14.26□□□□□ -0.13
IRF1-211ENST00000613424 THEM6Q8WUY1 208 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 RDH12Q96NR8 316 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 OR2J1Q9GZK6 312 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 IMPAD1Q9NX62 359 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 SMPD3Q9NY59 655 aaPredicted RBP14.26□□□□□ -0.13
IRF1-211ENST00000613424 MYEF2Q9P2K5 600 aaKnown RBP14.26□□□□□ -0.13
IRF1-211ENST00000613424 STARD10Q9Y365 291 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 ARFGEF3Q5TH69 2177 aa14.26□□□□□ -0.13
IRF1-211ENST00000613424 OTOGQ6ZRI0 2925 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 IGLV3-9A0A075B6K5 115 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 H7C417 338 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 SLC16A6O15403 523 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 NDUFS7O75251 213 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 MRPL3P09001 348 aaKnown RBP14.25□□□□□ -0.13
IRF1-211ENST00000613424 ACSM4P0C7M7 580 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 MPV17P39210 176 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 RGS6P49758 472 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 TPTEP56180 551 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 SELENOVP59797 346 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 SLC34A1Q06495 639 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 TAF13Q15543 124 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 SPATC1Q76KD6 591 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 ZNF771Q7L3S4 317 aaPredicted RBP14.25□□□□□ -0.13
IRF1-211ENST00000613424 ZNF454Q8N9F8 522 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 IPCEF1Q8WWN9 437 aaPredicted RBP14.25□□□□□ -0.13
IRF1-211ENST00000613424 SPTSSAQ969W0 71 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 ZNF582Q96NG8 517 aaPredicted RBP14.25□□□□□ -0.13
IRF1-211ENST00000613424 AMELYQ99218 206 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 COPS4Q9BT78 406 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 YIPF3Q9GZM5 350 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 POFUT1Q9H488 388 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 HAO2Q9NYQ3 351 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 DNAJC27Q9NZQ0 273 aa14.25□□□□□ -0.13
IRF1-211ENST00000613424 FBXO9Q9UK97 447 aaPredicted RBP14.25□□□□□ -0.13
IRF1-211ENST00000613424 ZNF878C9JN71 531 aa14.24□□□□□ -0.13
IRF1-211ENST00000613424 H0YHG0 523 aa14.24□□□□□ -0.13
IRF1-211ENST00000613424 M0R135 149 aa14.24□□□□□ -0.13
IRF1-211ENST00000613424 LYNP07948 512 aa14.24□□□□□ -0.13
IRF1-211ENST00000613424 ALOX5APP20292 161 aa14.24□□□□□ -0.13
IRF1-211ENST00000613424 TUBG1P23258 451 aa14.24□□□□□ -0.13
IRF1-211ENST00000613424 GCH1P30793 250 aa14.24□□□□□ -0.13
IRF1-211ENST00000613424 HTR1FP30939 366 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms