RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 IL3RAP26951 378 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 CD52P31358 61 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 CSNK1G2P78368 415 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 SDHAF4Q5VUM1 108 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 C9orf131Q5VYM1 1079 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 OR2AE1Q8NHA4 323 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 RPL10LQ96L21 214 aaKnown RBP8.05□□□□□ -1.12
TTC28-208ENST00000612946 SMOQ99835 787 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 SELENOIQ9C0D9 397 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 PRO1933Q9H354 126 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 BCAS3Q9H6U6 928 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 FOXJ3Q9UPW0 622 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 IL33O95760 270 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 PPOXP50336 477 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 HLA-DRB3P79483 266 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 OR10J5Q8NHC4 309 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 CLEC2DQ9UHP7 191 aa8.05□□□□□ -1.12
TTC28-208ENST00000612946 ALS2Q96Q42 1657 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 hCG_1809904A0A1W2PP81 198 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 A0A1W2PR64 198 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 A0A1W2PRV1 198 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 RBFOX3A6NFN3 312 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 M0QYG6 137 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 PIRO00625 290 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 OR10J4P0C629 311 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 BLVRBP30043 206 aaPredicted RBP8.04□□□□□ -1.12
TTC28-208ENST00000612946 SPINT3P49223 89 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 KIAA0895LQ68EN5 471 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 TRNP1Q6NT89 227 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 TRIB1Q96RU8 372 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 TXNDC17Q9BRA2 123 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 ZNF385DQ9H6B1 395 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 CADP27708 2225 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 WNT7BP56706 349 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 KIR2DS3Q14952 304 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 OR8G1Q15617 311 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 DOK3Q7L591 496 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 FAM103A1Q9BTL3 118 aaKnown RBP8.04□□□□□ -1.12
TTC28-208ENST00000612946 PMP2P02689 132 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 NPBWR2P48146 333 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 CSNK1DP48730 415 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 OLIG2Q13516 323 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 IL13RA2Q14627 380 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 SCAMP5Q8TAC9 235 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 RXFP4Q8TDU9 374 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 IKZF4Q9H2S9 585 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 DNMT3BQ9UBC3 853 aaKnown RBP8.04□□□□□ -1.12
TTC28-208ENST00000612946 OR14J1Q9UGF5 321 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 FLVCR1Q9Y5Y0 555 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 RICTORQ6R327 1708 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 AQP7O14520 342 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 ORM1P02763 201 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 CD14P08571 375 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 CPMP14384 443 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 FOXA1P55317 472 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 PSRC1Q6PGN9 363 aaPredicted RBP8.04□□□□□ -1.12
TTC28-208ENST00000612946 ASB11Q8WXH4 323 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 NXPE3Q969Y0 559 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 F5H5K5 113 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 F3P13726 295 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 FCER1GP30273 86 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 PI4KAP42356 2102 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 ZNF252P-AS1Q0IIN9 211 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 INPP5JQ15735 1006 aaPredicted RBP8.04□□□□□ -1.12
TTC28-208ENST00000612946 OR2A1Q8NGT9 310 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 MSLNLQ96KJ4 702 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 STACQ99469 402 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 COL14A1Q05707 1796 aaKnown RBP8.04□□□□□ -1.12
TTC28-208ENST00000612946 YIF1AO95070 293 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 IL10RAQ13651 578 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 ZNF836Q6ZNA1 936 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 IL22RA1Q8N6P7 574 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 TMEM217Q8N7C4 229 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 MAP1LC3CQ9BXW4 147 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 OR5AC2Q9NZP5 309 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 ZNF264O43296 627 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 RAB38P57729 211 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 POLR2GP62487 172 aaKnown RBP eCLIP8.04□□□□□ -1.12
TTC28-208ENST00000612946 TMEM156Q8N614 296 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 CLEC4DQ8WXI8 215 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 APH1AQ96BI3 265 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 CMC2Q9NRP2 79 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 GPR34Q9UPC5 381 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 SLC25A4P12235 298 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 SUSD1Q6UWL2 747 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 DHRS13Q6UX07 377 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 LANCL3Q6ZV70 420 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 B3GAT1Q9P2W7 334 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 TMEM184BQ9Y519 407 aaPredicted RBP8.04□□□□□ -1.12
TTC28-208ENST00000612946 HIST1H1TP22492 207 aaPredicted RBP8.04□□□□□ -1.12
TTC28-208ENST00000612946 BRS3P32247 399 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 GJA4P35212 333 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 TCL1AP56279 114 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 TREML2Q5T2D2 321 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 EGLN2Q96KS0 407 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 SNX22Q96L94 193 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 ALX4Q9H161 411 aaPredicted RBP8.04□□□□□ -1.12
TTC28-208ENST00000612946 PPP1R3CQ9UQK1 317 aa8.04□□□□□ -1.12
TTC28-208ENST00000612946 PDE6DO43924 150 aa8.03□□□□□ -1.12
TTC28-208ENST00000612946 ERVFC1-1P60608 527 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms