RNA–Protein interactions for RNA: ENST00000611689.4

GRIA3-205, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-205ENST00000611689 COPS4Q9BT78 406 aa13.43□□□□□ -0.26
GRIA3-205ENST00000611689 FGF20Q9NP95 211 aaPredicted RBP13.43□□□□□ -0.26
GRIA3-205ENST00000611689 SLCO1C1Q9NYB5 712 aa13.43□□□□□ -0.26
GRIA3-205ENST00000611689 MYRFQ9Y2G1 1151 aa13.43□□□□□ -0.26
GRIA3-205ENST00000611689 PCDHGB5Q9Y5G0 923 aa13.43□□□□□ -0.26
GRIA3-205ENST00000611689 PCDHGB1Q9Y5G3 927 aa13.43□□□□□ -0.26
GRIA3-205ENST00000611689 F5H5K5 113 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 PHYHO14832 338 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 XPNPEP2O43895 674 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 FAM20BO75063 409 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 FADS2O95864 444 aaKnown RBP13.42□□□□□ -0.26
GRIA3-205ENST00000611689 NR4A1P22736 598 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 PCSK6P29122 969 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 OTX1P32242 354 aaPredicted RBP13.42□□□□□ -0.26
GRIA3-205ENST00000611689 CSNK2BP67870 215 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 ACTC1P68032 377 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 ACTA1P68133 377 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 GALK2Q01415 458 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 ROM1Q03395 351 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 KCTD18Q6PI47 426 aaPredicted RBP13.42□□□□□ -0.26
GRIA3-205ENST00000611689 LRRN1Q6UXK5 716 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 SSX6Q7RTT6 188 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 KRT77Q7Z794 578 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 ACBD7Q8N6N7 88 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 NEUROG1Q92886 237 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 SPTSSAQ969W0 71 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 C4orf45Q96LM5 186 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 OR8B4Q96RC9 309 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 DCLRE1CQ96SD1 692 aaKnown RBP13.42□□□□□ -0.26
GRIA3-205ENST00000611689 KCNJ15Q99712 375 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 RHNO1Q9BSD3 238 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 UBAP1Q9NZ09 502 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 PSORS1C1Q9UIG5 152 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 GRIP1Q9Y3R0 1128 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 PKDREJQ9NTG1 2253 aa13.42□□□□□ -0.26
GRIA3-205ENST00000611689 DAPL1A0PJW8 107 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 IRGMA1A4Y4 181 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 M0R135 149 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 PSMD9O00233 223 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 ICMTO60725 284 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 IGHA1P01876 353 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 H2BFMP0C1H6 154 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 ACSM4P0C7M7 580 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 PIPP12273 146 aaPredicted RBP13.41□□□□□ -0.26
GRIA3-205ENST00000611689 SSTR2P30874 369 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 PRKXP51817 358 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 UCP2P55851 309 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 TPTEP56180 551 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 GRB2P62993 217 aaKnown RBP13.41□□□□□ -0.26
GRIA3-205ENST00000611689 NKX6-1P78426 367 aaPredicted RBP13.41□□□□□ -0.26
GRIA3-205ENST00000611689 ZNF85Q03923 595 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 EGR3Q06889 387 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 ZNF672Q499Z4 452 aaPredicted RBP13.41□□□□□ -0.26
GRIA3-205ENST00000611689 KRT80Q6KB66 452 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 DEGS2Q6QHC5 323 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 NAA40Q86UY6 237 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.41□□□□□ -0.26
GRIA3-205ENST00000611689 ZNF679Q8IYX0 411 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 NUP37Q8NFH4 326 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 ZNF799Q96GE5 643 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 TTTY10Q9BZA0 68 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 CLEC4MQ9H2X3 399 aaPredicted RBP13.41□□□□□ -0.26
GRIA3-205ENST00000611689 ELOVL3Q9HB03 270 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 FKBP14Q9NWM8 211 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 CNOT2Q9NZN8 540 aaKnown RBP13.41□□□□□ -0.26
GRIA3-205ENST00000611689 EIF3KQ9UBQ5 218 aaKnown RBP13.41□□□□□ -0.26
GRIA3-205ENST00000611689 POU2F3Q9UKI9 436 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 SPEF1Q9Y4P9 236 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 LRRC42Q9Y546 428 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 ATP23Q9Y6H3 246 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 PTPN13Q12923 2485 aa13.41□□□□□ -0.26
GRIA3-205ENST00000611689 EFCAB10A6NFE3 127 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 E7EQL1 145 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 SLC1A7O00341 560 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 MAGEB4O15481 346 aaPredicted RBP13.4□□□□□ -0.26
GRIA3-205ENST00000611689 ZNF254O75437 659 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 NGFP01138 241 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 ADRA2AP08913 450 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 FAM157BP0CG42 384 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 DCKP27707 260 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 HSD11B1P28845 292 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 RAD52P43351 418 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 SNTB2Q13425 540 aaKnown RBP13.4□□□□□ -0.26
GRIA3-205ENST00000611689 ZNF684Q5T5D7 378 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 ARL9Q6T311 187 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 ZNF101Q8IZC7 436 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 IPCEF1Q8WWN9 437 aaPredicted RBP13.4□□□□□ -0.26
GRIA3-205ENST00000611689 AKAP1Q92667 903 aaKnown RBP eCLIP13.4□□□□□ -0.26
GRIA3-205ENST00000611689 ZNF649Q9BS31 505 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 JAM3Q9BX67 310 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 MROQ9BYG7 248 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 TBCCD1Q9NVR7 557 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 SCN3BQ9NY72 215 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 CISD1Q9NZ45 108 aaKnown RBP13.4□□□□□ -0.26
GRIA3-205ENST00000611689 MRM2Q9UI43 246 aaKnown RBP13.4□□□□□ -0.26
GRIA3-205ENST00000611689 IKZF2Q9UKS7 526 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 LRP12Q9Y561 859 aa13.4□□□□□ -0.26
GRIA3-205ENST00000611689 SMPD2O60906 423 aa13.39□□□□□ -0.27
GRIA3-205ENST00000611689 ABHD16AO95870 558 aa13.39□□□□□ -0.27
GRIA3-205ENST00000611689 CCDC159P0C7I6 412 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms