RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 LCN1P1Q5VSP4 162 aa19.81■□□□□ 0.76
SNX5-217ENST00000606557 LPCAT4Q643R3 524 aa19.81■□□□□ 0.76
SNX5-217ENST00000606557 ARL9Q6T311 187 aa19.81■□□□□ 0.76
SNX5-217ENST00000606557 UNQ6126/PRO20091Q6UXV3 157 aa19.81■□□□□ 0.76
SNX5-217ENST00000606557 FAM81AQ8TBF8 368 aa19.81■□□□□ 0.76
SNX5-217ENST00000606557 DCLRE1CQ96SD1 692 aaKnown RBP19.81■□□□□ 0.76
SNX5-217ENST00000606557 TEAD3Q99594 435 aa19.81■□□□□ 0.76
SNX5-217ENST00000606557 ELOVL3Q9HB03 270 aa19.81■□□□□ 0.76
SNX5-217ENST00000606557 DDX28Q9NUL7 540 aaKnown RBP19.81■□□□□ 0.76
SNX5-217ENST00000606557 TBCCD1Q9NVR7 557 aa19.81■□□□□ 0.76
SNX5-217ENST00000606557 FZR1Q9UM11 496 aa19.81■□□□□ 0.76
SNX5-217ENST00000606557 GRIP1Q9Y3R0 1128 aa19.81■□□□□ 0.76
SNX5-217ENST00000606557 H7C417 338 aa19.8■□□□□ 0.76
SNX5-217ENST00000606557 CASQ2O14958 399 aaPredicted RBP19.8■□□□□ 0.76
SNX5-217ENST00000606557 ZNF250P15622 560 aa19.8■□□□□ 0.76
SNX5-217ENST00000606557 NAA10P41227 235 aaPredicted RBP19.8■□□□□ 0.76
SNX5-217ENST00000606557 EVX1P49640 407 aa19.8■□□□□ 0.76
SNX5-217ENST00000606557 LRRC36Q1X8D7 754 aa19.8■□□□□ 0.76
SNX5-217ENST00000606557 MEPCEQ7L2J0 689 aaKnown RBP19.8■□□□□ 0.76
SNX5-217ENST00000606557 SHFQ7M4L6 423 aa19.8■□□□□ 0.76
SNX5-217ENST00000606557 LRP11Q86VZ4 500 aa19.8■□□□□ 0.76
SNX5-217ENST00000606557 OR8J1Q8NGP2 316 aa19.8■□□□□ 0.76
SNX5-217ENST00000606557 SLAMF6Q96DU3 332 aa19.8■□□□□ 0.76
SNX5-217ENST00000606557 DOK1Q99704 481 aa19.8■□□□□ 0.76
SNX5-217ENST00000606557 SYT3Q9BQG1 590 aa19.8■□□□□ 0.76
SNX5-217ENST00000606557 MAP1AP78559 2803 aaPredicted RBP19.79■□□□□ 0.76
SNX5-217ENST00000606557 DLGAP1O14490 977 aa19.79■□□□□ 0.76
SNX5-217ENST00000606557 BMP4P12644 408 aa19.79■□□□□ 0.76
SNX5-217ENST00000606557 PPP1CBP62140 327 aa19.79■□□□□ 0.76
SNX5-217ENST00000606557 EIF2B1Q14232 305 aaKnown RBP19.79■□□□□ 0.76
SNX5-217ENST00000606557 GGTLC2Q14390 218 aa19.79■□□□□ 0.76
SNX5-217ENST00000606557 SPATA46Q5T0L3 261 aa19.79■□□□□ 0.76
SNX5-217ENST00000606557 KRTAP1-3Q8IUG1 177 aa19.79■□□□□ 0.76
SNX5-217ENST00000606557 GID4Q8IVV7 300 aa19.79■□□□□ 0.76
SNX5-217ENST00000606557 C1orf174Q8IYL3 243 aa19.79■□□□□ 0.76
SNX5-217ENST00000606557 OTOSQ8NHW6 89 aa19.79■□□□□ 0.76
SNX5-217ENST00000606557 SLC25A40Q8TBP6 338 aa19.79■□□□□ 0.76
SNX5-217ENST00000606557 IPCEF1Q8WWN9 437 aaPredicted RBP19.79■□□□□ 0.76
SNX5-217ENST00000606557 TRMT61AQ96FX7 289 aaKnown RBP19.79■□□□□ 0.76
SNX5-217ENST00000606557 MARS2Q96GW9 593 aaKnown RBP19.79■□□□□ 0.76
SNX5-217ENST00000606557 RDH12Q96NR8 316 aa19.79■□□□□ 0.76
SNX5-217ENST00000606557 C8orf4Q9NR00 106 aa19.79■□□□□ 0.76
SNX5-217ENST00000606557 SMPD3Q9NY59 655 aaPredicted RBP19.79■□□□□ 0.76
SNX5-217ENST00000606557 MYEF2Q9P2K5 600 aaKnown RBP19.79■□□□□ 0.76
SNX5-217ENST00000606557 PMF1-BGLAPU3KQ54 211 aa19.79■□□□□ 0.76
SNX5-217ENST00000606557 VPS13CQ709C8 3753 aa19.78■□□□□ 0.76
SNX5-217ENST00000606557 IGLV3-9A0A075B6K5 115 aa19.78■□□□□ 0.76
SNX5-217ENST00000606557 SLC22A31A6NKX4 558 aa19.78■□□□□ 0.76
SNX5-217ENST00000606557 ACSM4P0C7M7 580 aa19.78■□□□□ 0.76
SNX5-217ENST00000606557 OTX1P32242 354 aaPredicted RBP19.78■□□□□ 0.76
SNX5-217ENST00000606557 PPOXP50336 477 aa19.78■□□□□ 0.76
SNX5-217ENST00000606557 ATP5J2P56134 94 aa19.78■□□□□ 0.76
SNX5-217ENST00000606557 OGFRL1Q5TC84 451 aaPredicted RBP19.78■□□□□ 0.76
SNX5-217ENST00000606557 GALNT4Q8N4A0 578 aa19.78■□□□□ 0.76
SNX5-217ENST00000606557 PACRGLQ8N7B6 248 aa19.78■□□□□ 0.76
SNX5-217ENST00000606557 SYNPRQ8TBG9 265 aa19.78■□□□□ 0.76
SNX5-217ENST00000606557 AMELYQ99218 206 aa19.78■□□□□ 0.76
SNX5-217ENST00000606557 ABHD6Q9BV23 337 aa19.78■□□□□ 0.76
SNX5-217ENST00000606557 OR2J1Q9GZK6 312 aa19.78■□□□□ 0.76
SNX5-217ENST00000606557 POFUT1Q9H488 388 aa19.78■□□□□ 0.76
SNX5-217ENST00000606557 IMPAD1Q9NX62 359 aa19.78■□□□□ 0.76
SNX5-217ENST00000606557 H2AFY2Q9P0M6 372 aaPredicted RBP19.78■□□□□ 0.76
SNX5-217ENST00000606557 NKX1-2Q9UD57 310 aaPredicted RBP19.78■□□□□ 0.76
SNX5-217ENST00000606557 GMPPBQ9Y5P6 360 aa19.78■□□□□ 0.76
SNX5-217ENST00000606557 ZNF878C9JN71 531 aa19.77■□□□□ 0.76
SNX5-217ENST00000606557 J3QW42 95 aa19.77■□□□□ 0.76
SNX5-217ENST00000606557 NDUFS7O75251 213 aa19.77■□□□□ 0.76
SNX5-217ENST00000606557 CLPTM1O96005 669 aa19.77■□□□□ 0.76
SNX5-217ENST00000606557 RGS6P49758 472 aa19.77■□□□□ 0.76
SNX5-217ENST00000606557 KLF3P57682 345 aaPredicted RBP19.77■□□□□ 0.76
SNX5-217ENST00000606557 SLC16A9Q7RTY1 509 aa19.77■□□□□ 0.76
SNX5-217ENST00000606557 ZNF454Q8N9F8 522 aa19.77■□□□□ 0.76
SNX5-217ENST00000606557 TRUB1Q8WWH5 349 aaKnown RBP19.77■□□□□ 0.76
SNX5-217ENST00000606557 UBE2FQ969M7 185 aa19.77■□□□□ 0.76
SNX5-217ENST00000606557 FAM118AQ9NWS6 357 aa19.77■□□□□ 0.76
SNX5-217ENST00000606557 DUSP13Q9UII6 198 aa19.77■□□□□ 0.76
SNX5-217ENST00000606557 FBXO9Q9UK97 447 aaPredicted RBP19.77■□□□□ 0.76
SNX5-217ENST00000606557 ITPR3Q14573 2671 aa19.76■□□□□ 0.75
SNX5-217ENST00000606557 F5H5K5 113 aa19.76■□□□□ 0.75
SNX5-217ENST00000606557 H3BSA7 217 aa19.76■□□□□ 0.75
SNX5-217ENST00000606557 IGHV4-39P01824 125 aa19.76■□□□□ 0.75
SNX5-217ENST00000606557 MRPL3P09001 348 aaKnown RBP19.76■□□□□ 0.75
SNX5-217ENST00000606557 MPV17P39210 176 aa19.76■□□□□ 0.75
SNX5-217ENST00000606557 ZNF718Q3SXZ3 478 aa19.76■□□□□ 0.75
SNX5-217ENST00000606557 Q5PR19 223 aa19.76■□□□□ 0.75
SNX5-217ENST00000606557 MBNL2Q5VZF2 373 aaKnown RBP19.76■□□□□ 0.75
SNX5-217ENST00000606557 COLCA1Q6ZS62 124 aa19.76■□□□□ 0.75
SNX5-217ENST00000606557 SPATC1Q76KD6 591 aa19.76■□□□□ 0.75
SNX5-217ENST00000606557 KLF14Q8TD94 323 aaPredicted RBP19.76■□□□□ 0.75
SNX5-217ENST00000606557 RNF133Q8WVZ7 376 aa19.76■□□□□ 0.75
SNX5-217ENST00000606557 SPTSSAQ969W0 71 aa19.76■□□□□ 0.75
SNX5-217ENST00000606557 APOBEC3DQ96AK3 386 aaPredicted RBP19.76■□□□□ 0.75
SNX5-217ENST00000606557 ZNF582Q96NG8 517 aaPredicted RBP19.76■□□□□ 0.75
SNX5-217ENST00000606557 CNN2Q99439 309 aaKnown RBP19.76■□□□□ 0.75
SNX5-217ENST00000606557 COPS4Q9BT78 406 aa19.76■□□□□ 0.75
SNX5-217ENST00000606557 YIPF3Q9GZM5 350 aa19.76■□□□□ 0.75
SNX5-217ENST00000606557 CENPMQ9NSP4 180 aa19.76■□□□□ 0.75
SNX5-217ENST00000606557 HAO2Q9NYQ3 351 aa19.76■□□□□ 0.75
SNX5-217ENST00000606557 DNAJC27Q9NZQ0 273 aa19.76■□□□□ 0.75
SNX5-217ENST00000606557 KLHDC2Q9Y2U9 406 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms