RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 NSUN5P1Q3KNT7 163 aa12.69□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 PIP4P2Q8N4L2 257 aa12.69□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 BHLHE23Q8NDY6 225 aa12.69□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 OR5R1Q8NH85 324 aa12.69□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 MOSPD2Q8NHP6 518 aa12.69□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 NPRL2Q8WTW4 380 aa12.69□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 ZNF426Q9BUY5 554 aa12.69□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 ROPN1BQ9BZX4 212 aaPredicted RBP12.69□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 TXNIPQ9H3M7 391 aa12.69□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 ROPN1Q9HAT0 212 aaPredicted RBP12.69□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 MEPEQ9NQ76 525 aaPredicted RBP12.69□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 SDR39U1Q9NRG7 319 aaPredicted RBP12.69□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 CORO2BQ9UQ03 480 aa12.69□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 A0A1B0GVI7 797 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 NPIPB13A6NJU9 1138 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 NPIPB4C9JG80 1138 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 J3QW42 95 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 UBDO15205 165 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 MLNRO43193 412 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 ADAM20O43506 726 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 OR7A10O76100 309 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 LYPD3O95274 346 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 PAHP00439 452 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 OPN1SWP03999 348 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 KITP10721 976 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 EEF1B2P24534 225 aaKnown RBP12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 FPR3P25089 353 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 PMELP40967 661 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 DUSP7Q16829 419 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 DEFB121Q5J5C9 76 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 FOXB2Q5VYV0 432 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 SFRP4Q6FHJ7 346 aaPredicted RBP12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 FBXW12Q6X9E4 464 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 C1orf122Q6ZSJ8 110 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 VMO1Q7Z5L0 202 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 IGFN1Q86VF2 1251 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 C10orf111Q8N326 155 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 ERGIC1Q969X5 290 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 RASD2Q96D21 266 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 SGTBQ96EQ0 304 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 PCDHAC1Q9H158 963 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 SEMA6AQ9H2E6 1030 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 TMEM100Q9NV29 134 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 SLC25A37Q9NYZ2 338 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 CTSZQ9UBR2 303 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 SIGLEC9Q9Y336 463 aa12.68□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 LOC100653049A0A140TA62 436 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 EVPLLA8MZ36 301 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 KRT34O76011 436 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 HOXB9P17482 250 aaPredicted RBP12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 GATA4P43694 442 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 RGS6P49758 472 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 EMX1Q04741 257 aaPredicted RBP12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 LAPTM4AQ15012 233 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 OR8B8Q15620 311 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 ALG10Q5BKT4 473 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 INTS11Q5TA45 600 aaKnown RBP12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 FOXL2NBQ6ZUU3 175 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 RBM45Q8IUH3 476 aaKnown RBP12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 LYG1Q8N1E2 194 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 KLHDC1Q8N7A1 406 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 BOLLQ8N9W6 283 aaKnown RBP12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 PCYOX1LQ8NBM8 494 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 OR4C13Q8NGP0 309 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 OR2T6Q8NHC8 308 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 PFN4Q8NHR9 129 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 Q8TCH9 128 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 CFHR4Q92496 578 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 ZNF583Q96ND8 569 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 EMC7Q9NPA0 242 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 POLE4Q9NR33 117 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 UFSP2Q9NUQ7 469 aa12.67□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 NDUFA2O43678 99 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 FAM20BO75063 409 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 ECDO95905 644 aaPredicted RBP12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 HLA-DPB1P04440 258 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 EFNB2P52799 333 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 RPL27P61353 136 aaKnown RBP12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 GUCA2AQ02747 115 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 CDONQ4KMG0 1287 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 LRIF1Q5T3J3 769 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 CCBE1Q6UXH8 406 aaPredicted RBP12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 BTN2A1Q7KYR7 527 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 CELF2-AS1Q8N7Q2 184 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 OR4F17Q8NGA8 305 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 SLC26A7Q8TE54 656 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 SLC7A6Q92536 515 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 R3HDM4Q96D70 268 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 OR4F4Q96R69 305 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 PAIP2Q9BPZ3 127 aaKnown RBP12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 CNTD2Q9H8S5 307 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 SMURF1Q9HCE7 757 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 TRIM36Q9NQ86 728 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 ONECUT1Q9UBC0 465 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 KPTNQ9Y664 436 aa12.66□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 IQCF6A8MYZ5 107 aa12.65□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 M0QX08 132 aa12.65□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 OR10H3O60404 316 aa12.65□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 VSIG10L2P0DP72 767 aa12.65□□□□□ -0.38
NEDD8-MDP1-204ENST00000605847 CD69Q07108 199 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms