RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 SPRR3Q9UBC9 169 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 EXTL2Q9UBQ6 330 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 HHLA2Q9UM44 414 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 TRBV5-7A0A0A0MS05 114 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 LOC107986453A0A1B0GWG9 222 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 ANXA2P2A6NMY6 339 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 IFITM5A6NNB3 132 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 CD2P06729 351 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 EIF4EP06730 217 aaKnown RBP13.36□□□□□ -0.27
HIF3A-218ENST00000600383 ANXA2P07355 339 aaKnown RBP13.36□□□□□ -0.27
HIF3A-218ENST00000600383 OCMP0CE72 109 aaPredicted RBP13.36□□□□□ -0.27
HIF3A-218ENST00000600383 B4GALT1P15291 398 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 ADRA2CP18825 462 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 PSMD7P51665 324 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 CEACAM16Q2WEN9 425 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 XKRXQ6PP77 449 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 LINGO2Q7L985 606 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 MCEMP1Q8IX19 187 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 ZNF283Q8N7M2 679 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 SNIP1Q8TAD8 396 aaKnown RBP13.36□□□□□ -0.27
HIF3A-218ENST00000600383 CHPT1Q8WUD6 406 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 CCDC32Q9BV29 185 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 SRRQ9GZT4 340 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 ZCCHC4Q9H5U6 513 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 MGAQ8IWI9 3026 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 F5H5K5 113 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 WISP2O76076 250 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 MRPS34P82930 218 aaKnown RBP13.36□□□□□ -0.27
HIF3A-218ENST00000600383 TSPO2Q5TGU0 170 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 FAM27BQ5VT28 67 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 Q6ZNX1 250 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 COMMD2Q86X83 199 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 ZADH2Q8N4Q0 377 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 FBXO17Q96EF6 278 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 PLEK2Q9NYT0 353 aa13.36□□□□□ -0.27
HIF3A-218ENST00000600383 LMX1BO60663 402 aa13.35□□□□□ -0.27
HIF3A-218ENST00000600383 TTRP02766 147 aa13.35□□□□□ -0.27
HIF3A-218ENST00000600383 PATE4P0C8F1 98 aa13.35□□□□□ -0.27
HIF3A-218ENST00000600383 DCTDP32321 178 aa13.35□□□□□ -0.27
HIF3A-218ENST00000600383 TALDO1P37837 337 aa13.35□□□□□ -0.27
HIF3A-218ENST00000600383 CX3CR1P49238 355 aa13.35□□□□□ -0.27
HIF3A-218ENST00000600383 ZNF121P58317 390 aaPredicted RBP13.35□□□□□ -0.27
HIF3A-218ENST00000600383 GFOD2Q3B7J2 385 aa13.35□□□□□ -0.27
HIF3A-218ENST00000600383 C9orf135Q5VTT2 229 aa13.35□□□□□ -0.27
HIF3A-218ENST00000600383 TMEM244Q5VVB8 128 aa13.35□□□□□ -0.27
HIF3A-218ENST00000600383 RHOUQ7L0Q8 258 aa13.35□□□□□ -0.27
HIF3A-218ENST00000600383 LRRTM1Q86UE6 522 aa13.35□□□□□ -0.27
HIF3A-218ENST00000600383 NAA40Q86UY6 237 aa13.35□□□□□ -0.27
HIF3A-218ENST00000600383 LRRC28Q86X40 367 aaPredicted RBP13.35□□□□□ -0.27
HIF3A-218ENST00000600383 CPT1CQ8TCG5 803 aa13.35□□□□□ -0.27
HIF3A-218ENST00000600383 SLC7A6Q92536 515 aa13.35□□□□□ -0.27
HIF3A-218ENST00000600383 WDYHV1Q96HA8 205 aa13.35□□□□□ -0.27
HIF3A-218ENST00000600383 EMC3Q9P0I2 261 aa13.35□□□□□ -0.27
HIF3A-218ENST00000600383 ABRACLQ9P1F3 81 aa13.35□□□□□ -0.27
HIF3A-218ENST00000600383 FREM1Q5H8C1 2179 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 IGKV3D-15A0A087WSY6 115 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 ISPDA4D126 451 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 AIPO00170 330 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 CEACAM4O75871 244 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 ISG15P05161 165 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 ACSM4P0C7M7 580 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 UBCP0CG48 685 aaKnown RBP13.34□□□□□ -0.27
HIF3A-218ENST00000600383 NPR2P20594 1047 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 SLC6A9P48067 706 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 FOXL2NBQ6ZUU3 175 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 FAM57BQ71RH2 274 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 ELMOD2Q8IZ81 293 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 OR51E1Q8TCB6 317 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 COX4I2Q96KJ9 171 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 NKX3-1Q99801 234 aaPredicted RBP13.34□□□□□ -0.27
HIF3A-218ENST00000600383 FOXB1Q99853 325 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 NIPAL2Q9H841 368 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 LIN7BQ9HAP6 207 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 GPR35Q9HC97 309 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 DDX28Q9NUL7 540 aaKnown RBP13.34□□□□□ -0.27
HIF3A-218ENST00000600383 TMEM38BQ9NVV0 291 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 PARPBPQ9NWS1 579 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 CKLFQ9UBR5 152 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 TNRC6AQ8NDV7 1962 aaKnown RBP13.34□□□□□ -0.27
HIF3A-218ENST00000600383 BOD1L1Q8NFC6 3051 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 APC2O95996 2303 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 SYT7O43581 403 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 TGM6O95932 706 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 YES1P07947 543 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 IL7P13232 177 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 GRB2P62993 217 aaKnown RBP13.34□□□□□ -0.27
HIF3A-218ENST00000600383 OXA1LQ15070 435 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 TAB1Q15750 504 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 Q8N402 240 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 OR4M1Q8NGD0 313 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 LGALS14Q8TCE9 139 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 THRSPQ92748 146 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 TMEM45BQ96B21 275 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 FAM210AQ96ND0 272 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 SLCO5A1Q9H2Y9 848 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 SLC7A10Q9NS82 523 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 TAS2R4Q9NYW5 299 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 MRPS7Q9Y2R9 242 aaKnown RBP13.34□□□□□ -0.27
HIF3A-218ENST00000600383 CEP295Q9C0D2 2601 aa13.34□□□□□ -0.27
HIF3A-218ENST00000600383 ACACAQ13085 2346 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms