RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 WNT5AP41221 380 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 ZNF133P52736 654 aaPredicted RBP11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 BTG1P62324 171 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 TNFAIP6P98066 277 aaPredicted RBP11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 FHL1Q13642 323 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 KRT72Q14CN4 511 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 ZNF718Q3SXZ3 478 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 TMEM53Q6P2H8 277 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 TBPL2Q6SJ96 375 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 BTNL3Q6UXE8 466 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 LRRN1Q6UXK5 716 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 C1orf174Q8IYL3 243 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 DEFB107AQ8IZN7 70 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 LRRC75AQ8NAA5 344 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 OR1J2Q8NGS2 313 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 OR13C2Q8NGS9 318 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 SLC25A40Q8TBP6 338 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 SLC7A13Q8TCU3 470 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 KLF14Q8TD94 323 aaPredicted RBP11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 RAB40AQ8WXH6 277 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 MCHR2Q969V1 340 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 OR2J1Q9GZK6 312 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 TXNIPQ9H3M7 391 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 NDE1Q9NXR1 346 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 IL20RAQ9UHF4 553 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 V9GYQ6 96 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 IQCMA0A1B0GVH7 501 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 A0A1W2PRQ8 180 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 CEACAM18A8MTB9 384 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 EFCAB9A8MZ26 197 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 PLXNB1O43157 2135 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 DIRAS1O95057 198 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 IGHV4-59P01825 116 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 H1F0P07305 194 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 ADH4P08319 380 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 RHCEP18577 417 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 GPR4P46093 362 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 SLC9A3P48764 834 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 FGF12P61328 243 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 MXRA7P84157 204 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 TOP3AQ13472 1001 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 DGCR6Q14129 220 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 TAF11Q15544 211 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 ANKDD1AQ495B1 522 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 OXLD1Q5BKU9 147 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 C10orf128Q5T292 105 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 FAM205BPQ63HN1 556 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 ZNF774Q6NX45 483 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 CCBE1Q6UXH8 406 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 TMPRSS11FQ6ZWK6 438 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 SLC16A14Q7RTX9 510 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 OAFQ86UD1 273 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 IGFN1Q86VF2 1251 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 TMEM86BQ8N661 226 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 ZNF283Q8N7M2 679 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 OR51A7Q8NH64 312 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 HDAC2Q92769 488 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 DACT3Q96B18 629 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 NMD3Q96D46 503 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 PYURFQ96I23 114 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 DHRS1Q96LJ7 313 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 SIGLEC11Q96RL6 698 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 SSBP3Q9BWW4 388 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 LRMDAQ9H2I8 198 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 C1orf198Q9H425 327 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 FAM53CQ9NYF3 392 aa11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 STX18Q9P2W9 335 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-208ENST00000595726 TANC2Q9HCD6 1990 aa11.46□□□□□ -0.58
SHKBP1-208ENST00000595726 IGKV1D-43A0A0B4J1Z2 117 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 SLC2A10O95528 541 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 PTHP01270 115 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 OPN1MWP04001 364 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 CD55P08174 381 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 OPN1MW2P0DN77 364 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 OPN1MW3P0DN78 364 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 APLNRP35414 380 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 ZNF84P51523 738 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 MNAT1P51948 309 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 CTXN1P60606 82 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 RPL27P61353 136 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 PLP2Q04941 152 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 FMODQ06828 376 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 SPATS1Q496A3 300 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 NRN1LQ496H8 165 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 FGD3Q5JSP0 725 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 Q6ZSV7 163 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 LRRC18Q8N456 261 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 CCDC197Q8NCU1 140 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 DYRK2Q92630 601 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 FAM46AQ96IP4 442 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 FAM71F1Q96KD3 344 aaPredicted RBP11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 NSMCE2Q96MF7 247 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 SMURF2Q9HAU4 748 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 AURKAIP1Q9NWT8 199 aaPredicted RBP11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 ZDHHC8Q9ULC8 765 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 TMEM5Q9Y2B1 443 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 LRCH1Q9Y2L9 728 aa11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 FAM32AQ9Y421 112 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-208ENST00000595726 DOCK11Q5JSL3 2073 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 LOC100509620A0A075B734 347 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms