RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SEC61A1P61619 476 aaKnown RBP12.42□□□□□ -0.42
PNKP-202ENST00000593706 BTG1P62324 171 aa12.42□□□□□ -0.42
PNKP-202ENST00000593706 LCN6P62502 163 aa12.42□□□□□ -0.42
PNKP-202ENST00000593706 ESCO2Q56NI9 601 aa12.42□□□□□ -0.42
PNKP-202ENST00000593706 SLC25A28Q96A46 364 aa12.42□□□□□ -0.42
PNKP-202ENST00000593706 RSRC1Q96IZ7 334 aaKnown RBP12.42□□□□□ -0.42
PNKP-202ENST00000593706 Q96M85 177 aa12.42□□□□□ -0.42
PNKP-202ENST00000593706 NSMCE2Q96MF7 247 aa12.42□□□□□ -0.42
PNKP-202ENST00000593706 PATZ1Q9HBE1 687 aaKnown RBP12.42□□□□□ -0.42
PNKP-202ENST00000593706 IL1RAPQ9NPH3 570 aa12.42□□□□□ -0.42
PNKP-202ENST00000593706 NRIP3Q9NQ35 241 aa12.42□□□□□ -0.42
PNKP-202ENST00000593706 OR5V1Q9UGF6 321 aa12.42□□□□□ -0.42
PNKP-202ENST00000593706 TCRBV5S2A0A599 114 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 SURF4O15260 269 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 AHCYL1O43865 530 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 DOK2O60496 412 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 GMNNO75496 209 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 NDUFB2O95178 105 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 SCG5P05408 212 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 ZNF12P17014 697 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 MAGEA2P43356 314 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 HTR5AP47898 357 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 MNAT1P51948 309 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 PSG7Q13046 419 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 CDK5R2Q13319 367 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 ENDOGQ14249 297 aaKnown RBP12.41□□□□□ -0.42
PNKP-202ENST00000593706 TMEM155Q4W5P6 130 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 OR52J3Q8NH60 311 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 MS4A7Q9GZW8 240 aaPredicted RBP12.41□□□□□ -0.42
PNKP-202ENST00000593706 UNKLQ9H9P5 680 aaKnown RBP12.41□□□□□ -0.42
PNKP-202ENST00000593706 ACTR3BQ9P1U1 418 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 KLHL21Q9UJP4 597 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 PPP1R3CQ9UQK1 317 aa12.41□□□□□ -0.42
PNKP-202ENST00000593706 TEX13CA0A0J9YWL9 993 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 PRSS37A4D1T9 235 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 TRAPPC2LH3BP13 241 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 IMPA2O14732 288 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 TXNDC12O95881 172 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 CTLA4P16410 223 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 FPR3P25089 353 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 SDHAP31040 664 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 RPL4P36578 427 aaKnown RBP12.4□□□□□ -0.42
PNKP-202ENST00000593706 RBMXP38159 391 aaKnown RBP12.4□□□□□ -0.42
PNKP-202ENST00000593706 MDH2P40926 338 aaKnown RBP12.4□□□□□ -0.42
PNKP-202ENST00000593706 SLC6A9P48067 706 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 SCRN3Q0VDG4 424 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 KRR1Q13601 381 aaKnown RBP12.4□□□□□ -0.42
PNKP-202ENST00000593706 ZMYND11Q15326 602 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 KLF17Q5JT82 389 aaPredicted RBP12.4□□□□□ -0.42
PNKP-202ENST00000593706 BCL6BQ8N143 479 aaPredicted RBP12.4□□□□□ -0.42
PNKP-202ENST00000593706 ZNF283Q8N7M2 679 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 CCDC197Q8NCU1 140 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 ITLN1Q8WWA0 313 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 RASD2Q96D21 266 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 SAMD8Q96LT4 415 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 ZNF570Q96NI8 536 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 POFUT1Q9H488 388 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 EMC7Q9NPA0 242 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 POLE4Q9NR33 117 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 VSX1Q9NZR4 365 aaPredicted RBP12.4□□□□□ -0.42
PNKP-202ENST00000593706 GRHPRQ9UBQ7 328 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 IL20RAQ9UHF4 553 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 INSIG2Q9Y5U4 225 aa12.4□□□□□ -0.42
PNKP-202ENST00000593706 WNK1Q9H4A3 2382 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 UNC119BA6NIH7 251 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 A8MXK9 166 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 B2RBV5 119 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 GADD45GO95257 159 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 FABP3P05413 133 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 RNASE1P07998 156 aaKnown RBP12.39□□□□□ -0.43
PNKP-202ENST00000593706 CALB2P22676 271 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 GSSP48637 474 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 SMIM11AP58511 58 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 IL13RA1P78552 427 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 SPIBQ01892 262 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 GPR139Q6DWJ6 353 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 LCN8Q6JVE9 175 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 C1orf94Q6P1W5 598 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 SMARCD3Q6STE5 483 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 DPY19L2P2Q6ZN68 376 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 PTCHD4Q6ZW05 846 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 RRM2BQ7LG56 351 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 SYT9Q86SS6 491 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 ADCK1Q86TW2 530 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 ARHGAP24Q8N264 748 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 MUC20Q8N307 709 aaPredicted RBP12.39□□□□□ -0.43
PNKP-202ENST00000593706 PARP8Q8N3A8 854 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 NSL1Q96IY1 281 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 C1orf147Q96MC9 270 aaPredicted RBP12.39□□□□□ -0.43
PNKP-202ENST00000593706 ZNF48Q96MX3 618 aaPredicted RBP12.39□□□□□ -0.43
PNKP-202ENST00000593706 OR2V2Q96R30 315 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 TBCCD1Q9NVR7 557 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 IL19Q9UHD0 177 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 LRCH1Q9Y2L9 728 aa12.39□□□□□ -0.43
PNKP-202ENST00000593706 POLR3KQ9Y2Y1 108 aaPredicted RBP12.39□□□□□ -0.43
PNKP-202ENST00000593706 IGHV3OR16-10A0A075B7F0 116 aa12.38□□□□□ -0.43
PNKP-202ENST00000593706 F5H0A9 414 aaPredicted RBP12.38□□□□□ -0.43
PNKP-202ENST00000593706 SGCEO43556 437 aa12.38□□□□□ -0.43
PNKP-202ENST00000593706 COX5BP10606 129 aa12.38□□□□□ -0.43
PNKP-202ENST00000593706 RPS2P15880 293 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms