RNA–Protein interactions for RNA: ENST00000592594.5

TMC6-223, Transcript of transmembrane channel like 6, human

TSL 4

Gene TMC6, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-223	ENST00000592594	PTGES3	Q15185	160 aa	Known RBP	13.92	□□□□□ -0.18
TMC6-223	ENST00000592594	MBNL2	Q5VZF2	373 aa	Known RBP	13.92	□□□□□ -0.18
TMC6-223	ENST00000592594	PLBD1	Q6P4A8	553 aa		13.92	□□□□□ -0.18
TMC6-223	ENST00000592594	ST7L	Q8TDW4	575 aa		13.92	□□□□□ -0.18
TMC6-223	ENST00000592594	C10orf105	Q8TEF2	133 aa		13.92	□□□□□ -0.18
TMC6-223	ENST00000592594	CENPN	Q96H22	339 aa	Predicted RBP	13.92	□□□□□ -0.18
TMC6-223	ENST00000592594	CIB1	Q99828	191 aa		13.92	□□□□□ -0.18
TMC6-223	ENST00000592594	DYNLRB1	Q9NP97	96 aa		13.92	□□□□□ -0.18
TMC6-223	ENST00000592594	TBCCD1	Q9NVR7	557 aa		13.92	□□□□□ -0.18
TMC6-223	ENST00000592594	TAAR3P	Q9P1P4	343 aa		13.92	□□□□□ -0.18
TMC6-223	ENST00000592594	KIF17	Q9P2E2	1029 aa		13.92	□□□□□ -0.18
TMC6-223	ENST00000592594	STARD10	Q9Y365	291 aa		13.92	□□□□□ -0.18
TMC6-223	ENST00000592594	DYSF	O75923	2080 aa		13.92	□□□□□ -0.18
TMC6-223	ENST00000592594		A0A1W2PPW3	197 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	CCDC182	A6NF36	153 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	SAC3D1	A6NKF1	404 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	ZAR1L	A6NP61	321 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	ACSM4	P0C7M7	580 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	BMP4	P12644	408 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	POLR2I	P36954	125 aa	Known RBP	13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	MMP15	P51511	669 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	EFNB1	P98172	346 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	TEX30	Q5JUR7	227 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	TMEM154	Q6P9G4	183 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	COLCA1	Q6ZS62	124 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	NAA40	Q86UY6	237 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	CPO	Q8IVL8	374 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	TIGD4	Q8IY51	512 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	OR6K6	Q8NGW6	343 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	AMELY	Q99218	206 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	REG4	Q9BYZ8	158 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	KRT84	Q9NSB2	600 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	DDX28	Q9NUL7	540 aa	Known RBP	13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	KCNG2	Q9UJ96	466 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	GRIP1	Q9Y3R0	1128 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	NF1	P21359	2839 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	ZFHX3	Q15911	3703 aa		13.91	□□□□□ -0.18
TMC6-223	ENST00000592594	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.9	□□□□□ -0.18	4e-8	■■■■□ 20.1
TMC6-223	ENST00000592594	ZSCAN5B	A6NJL1	495 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	LYNX1	G3V0Z9	82 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	PRKY	O43930	277 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	GLCE	O94923	617 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	HPX	P02790	462 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	SPARC	P09486	303 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	LYNX1	P0DP58	116 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	OTX1	P32242	354 aa	Predicted RBP	13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	MAGEB1	P43366	347 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	ENTPD1	P49961	510 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	ARHGDIA	P52565	204 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	PSG7	Q13046	419 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	HNRNPA0	Q13151	305 aa	Known RBP	13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	SPRN	Q5BIV9	151 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	SLX4IP	Q5VYV7	408 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	C12orf73	Q69YU5	71 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	DCXR	Q7Z4W1	244 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	ZDHHC13	Q8IUH4	622 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	ATF6B	Q99941	703 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	OSBPL10	Q9BXB5	764 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	EIF3K	Q9UBQ5	218 aa	Known RBP	13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	KLHDC2	Q9Y2U9	406 aa		13.9	□□□□□ -0.18
TMC6-223	ENST00000592594	VSTM5	A8MXK1	200 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594		E9PQ18	207 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594		H3BSA7	217 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	ZNF593	O00488	134 aa	Predicted RBP	13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	SELENOF	O60613	162 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	LY6G6D	O95868	133 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	HMGN1	P05114	100 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	ZNF823	P16415	610 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	IGFBP5	P24593	272 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	FMO3	P31513	532 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	ESRRG	P62508	458 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	HLX	Q14774	488 aa	Predicted RBP	13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	ZNF718	Q3SXZ3	478 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	CLEC2A	Q6UVW9	174 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	BCDIN3D	Q7Z5W3	292 aa	Known RBP	13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	NEU4	Q8WWR8	484 aa	Predicted RBP	13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	FAM168A	Q92567	244 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	YIPF5	Q969M3	257 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	ZMYND19	Q96E35	227 aa	Predicted RBP	13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	PITX2	Q99697	317 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	GABARAPL3	Q9BY60	117 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	RAB1B	Q9H0U4	201 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	OR51V1	Q9H2C8	321 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	ELOVL3	Q9HB03	270 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	TVP23B	Q9NYZ1	205 aa		13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.89	□□□□□ -0.19
TMC6-223	ENST00000592594	C17orf100	A8MU93	164 aa		13.88	□□□□□ -0.19
TMC6-223	ENST00000592594	PRR23D1	E9PI22	279 aa	Predicted RBP	13.88	□□□□□ -0.19
TMC6-223	ENST00000592594	LILRA1	O75019	489 aa		13.88	□□□□□ -0.19
TMC6-223	ENST00000592594	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.88	□□□□□ -0.19
TMC6-223	ENST00000592594	DAO	P14920	347 aa		13.88	□□□□□ -0.19
TMC6-223	ENST00000592594	GSTT1	P30711	240 aa		13.88	□□□□□ -0.19
TMC6-223	ENST00000592594	PRSS12	P56730	875 aa		13.88	□□□□□ -0.19
TMC6-223	ENST00000592594	NKPD1	Q17RQ9	610 aa		13.88	□□□□□ -0.19
TMC6-223	ENST00000592594	ZFP1	Q6P2D0	407 aa		13.88	□□□□□ -0.19
TMC6-223	ENST00000592594		Q6ZR03	302 aa		13.88	□□□□□ -0.19
TMC6-223	ENST00000592594	CXXC5	Q7LFL8	322 aa	Known RBP	13.88	□□□□□ -0.19
TMC6-223	ENST00000592594	DPY19L4	Q7Z388	723 aa		13.88	□□□□□ -0.19
TMC6-223	ENST00000592594	ERI1	Q8IV48	349 aa	Known RBP	13.88	□□□□□ -0.19
TMC6-223	ENST00000592594	OR2AJ1	Q8NGZ0	328 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms