RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 SIAH2O43255 324 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 CCDC159P0C7I6 412 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 PIPP12273 146 aaPredicted RBP11.8□□□□□ -0.52
VMP1-210ENST00000589823 DCKP27707 260 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 CALCRP30988 508 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 TPTEP56180 551 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 EGR3Q06889 387 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 RBM48Q5RL73 367 aaKnown RBP11.8□□□□□ -0.52
VMP1-210ENST00000589823 ADAM5Q6NVV9 412 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 DEGS2Q6QHC5 323 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 LRRN1Q6UXK5 716 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 UNQ6126/PRO20091Q6UXV3 157 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 STX19Q8N4C7 294 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 SNX33Q8WV41 574 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 IPCEF1Q8WWN9 437 aaPredicted RBP11.8□□□□□ -0.52
VMP1-210ENST00000589823 SLC7A6Q92536 515 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 TMEM80Q96HE8 168 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 KCNJ15Q99712 375 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 MROQ9BYG7 248 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 NIPAL2Q9H841 368 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 FGF20Q9NP95 211 aaPredicted RBP11.8□□□□□ -0.52
VMP1-210ENST00000589823 CHCHD3Q9NX63 227 aaKnown RBP11.8□□□□□ -0.52
VMP1-210ENST00000589823 PSORS1C1Q9UIG5 152 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 POU2F3Q9UKI9 436 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 BLOC1S6Q9UL45 172 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 GRIP1Q9Y3R0 1128 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 LRRC42Q9Y546 428 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 ATP23Q9Y6H3 246 aa11.8□□□□□ -0.52
VMP1-210ENST00000589823 SPTAN1Q13813 2472 aaKnown RBP11.8□□□□□ -0.52
VMP1-210ENST00000589823 USP9YO00507 2555 aaPredicted RBP11.79□□□□□ -0.52
VMP1-210ENST00000589823 ICE1Q9Y2F5 2266 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 PTGES3LE9PB15 166 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 ATP6V1G2-DDX39BF2Z307 99 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 J3QRE1 110 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 PSMD9O00233 223 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 ZNF254O75437 659 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 ABHD16AO95870 558 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 IGHA1P01876 353 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 APOC1P02654 83 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 KRT8P05787 483 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 DBHP09172 617 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 ZNF35P13682 527 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 OPRL1P41146 370 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 RGS6P49758 472 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 PRKXP51817 358 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 RIDAP52758 137 aaKnown RBP11.79□□□□□ -0.52
VMP1-210ENST00000589823 ROM1Q03395 351 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 SPOCK1Q08629 439 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 ZNF704Q6ZNC4 412 aaPredicted RBP11.79□□□□□ -0.52
VMP1-210ENST00000589823 AHSA2Q719I0 299 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 ZNF679Q8IYX0 411 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 RFLNBQ8N5W9 214 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 ZNF283Q8N7M2 679 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 MYDGFQ969H8 173 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 C4orf45Q96LM5 186 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 HS3ST6Q96QI5 342 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 OR8B4Q96RC9 309 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 ELOVL3Q9HB03 270 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 SLCO1C1Q9NYB5 712 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 MYRFQ9Y2G1 1151 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 EXOSC1Q9Y3B2 195 aaKnown RBP11.79□□□□□ -0.52
VMP1-210ENST00000589823 LRP12Q9Y561 859 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 DOPEY2Q9Y3R5 2298 aa11.79□□□□□ -0.52
VMP1-210ENST00000589823 METTL15A6NJ78 407 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 M0R135 149 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 MYL12AP19105 171 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 LOXP28300 417 aaPredicted RBP11.78□□□□□ -0.52
VMP1-210ENST00000589823 PCSK6P29122 969 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 RAD52P43351 418 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 SLC6A9P48067 706 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 ACTA2P62736 377 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 ACTG2P63267 376 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 ZNF85Q03923 595 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 ST3GAL4Q11206 333 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 GALEQ14376 348 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 KRTAP27-1Q3LI81 207 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 DRAM2Q6UX65 266 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 PLEKHG7Q6ZR37 379 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 SSX6Q7RTT6 188 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 FAM220AQ7Z4H9 259 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 LHFPL3Q86UP9 236 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 PAQR4Q8N4S7 273 aaPredicted RBP11.78□□□□□ -0.52
VMP1-210ENST00000589823 KBTBD8Q8NFY9 601 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 MARVELD3Q96A59 401 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 ZNF799Q96GE5 643 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 RHNO1Q9BSD3 238 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 TMEM204Q9BSN7 226 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 ALG8Q9BVK2 526 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 YTHDF1Q9BYJ9 559 aaKnown RBP11.78□□□□□ -0.52
VMP1-210ENST00000589823 BCL2L14Q9BZR8 327 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 SP140LQ9H930 580 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 UBAP1Q9NZ09 502 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 DIMT1Q9UNQ2 313 aaKnown RBP11.78□□□□□ -0.52
VMP1-210ENST00000589823 PCDHGB5Q9Y5G0 923 aa11.78□□□□□ -0.52
VMP1-210ENST00000589823 VSTM5A8MXK1 200 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 PRR32B1ATL7 298 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 SHISA9B4DS77 424 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 CTAG2O75638 210 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 SULT1C4O75897 302 aa11.77□□□□□ -0.53
VMP1-210ENST00000589823 PLAUP00749 431 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms