RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 SH3GLB1Q9Y371 365 aa12.68□□□□□ -0.38
IFT20-216ENST00000588477 ZNF879B4DU55 563 aa12.67□□□□□ -0.38
IFT20-216ENST00000588477 PIN1P1O15428 100 aa12.67□□□□□ -0.38
IFT20-216ENST00000588477 MLNRO43193 412 aa12.67□□□□□ -0.38
IFT20-216ENST00000588477 PIP5K1CO60331 668 aa12.67□□□□□ -0.38
IFT20-216ENST00000588477 SHOX2O60902 331 aaPredicted RBP12.67□□□□□ -0.38
IFT20-216ENST00000588477 CSF1P09603 554 aa12.67□□□□□ -0.38
IFT20-216ENST00000588477 MMP9P14780 707 aa12.67□□□□□ -0.38
IFT20-216ENST00000588477 TNFRSF1BP20333 461 aa12.67□□□□□ -0.38
IFT20-216ENST00000588477 IER3P46695 156 aa12.67□□□□□ -0.38
IFT20-216ENST00000588477 PIN1Q13526 163 aaPredicted RBP12.67□□□□□ -0.38
IFT20-216ENST00000588477 Q6ZPA2 131 aa12.67□□□□□ -0.38
IFT20-216ENST00000588477 VASH1Q7L8A9 365 aaPredicted RBP12.67□□□□□ -0.38
IFT20-216ENST00000588477 ZSCAN4Q8NAM6 433 aaPredicted RBP12.67□□□□□ -0.38
IFT20-216ENST00000588477 RASSF5Q8WWW0 418 aa12.67□□□□□ -0.38
IFT20-216ENST00000588477 ZNF582Q96NG8 517 aaPredicted RBP12.67□□□□□ -0.38
IFT20-216ENST00000588477 TECTBQ96PL2 329 aa12.67□□□□□ -0.38
IFT20-216ENST00000588477 EBF4Q9BQW3 602 aa12.67□□□□□ -0.38
IFT20-216ENST00000588477 WACQ9BTA9 647 aa12.67□□□□□ -0.38
IFT20-216ENST00000588477 TRIM15Q9C019 465 aa12.67□□□□□ -0.38
IFT20-216ENST00000588477 RIMS3Q9UJD0 308 aa12.67□□□□□ -0.38
IFT20-216ENST00000588477 MED31Q9Y3C7 131 aa12.67□□□□□ -0.38
IFT20-216ENST00000588477 C5orf63A6NC05 138 aa12.66□□□□□ -0.38
IFT20-216ENST00000588477 H7C1C5 153 aa12.66□□□□□ -0.38
IFT20-216ENST00000588477 IRF2P14316 349 aa12.66□□□□□ -0.38
IFT20-216ENST00000588477 PSMB10P40306 273 aa12.66□□□□□ -0.38
IFT20-216ENST00000588477 LCN6P62502 163 aa12.66□□□□□ -0.38
IFT20-216ENST00000588477 WDR93Q6P2C0 686 aa12.66□□□□□ -0.38
IFT20-216ENST00000588477 FBXW12Q6X9E4 464 aa12.66□□□□□ -0.38
IFT20-216ENST00000588477 BHLHE23Q8NDY6 225 aa12.66□□□□□ -0.38
IFT20-216ENST00000588477 LHX4Q969G2 390 aa12.66□□□□□ -0.38
IFT20-216ENST00000588477 WDFY2Q96P53 400 aa12.66□□□□□ -0.38
IFT20-216ENST00000588477 IGHV1-69DA0A0B4J2H0 117 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 A0A0U1RQK1 487 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 A6NIZ1 184 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 FBP2O00757 339 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 OR5F1O95221 314 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 IGHV1-69P01742 117 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 HLA-DPB1P04440 258 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 LIPFP07098 398 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 DBHP09172 617 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 IDH3AP50213 366 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 NPY4RP50391 375 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 CRYBA2P53672 197 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 RAP1BP61224 184 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 RAP1AP62834 184 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 FAM189A2Q15884 450 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 INTS11Q5TA45 600 aaKnown RBP12.65□□□□□ -0.38
IFT20-216ENST00000588477 METTL11BQ5VVY1 283 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 OTPQ5XKR4 325 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 CD276Q5ZPR3 534 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 GDPGP1Q6ZNW5 385 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 DHDDSQ86SQ9 333 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 MICU2Q8IYU8 434 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 LRRC75AQ8NAA5 344 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 PCYOX1LQ8NBM8 494 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 SCCPDHQ8NBX0 429 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 OR5L1Q8NGL2 311 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 CGREF1Q99674 301 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 MMADHCQ9H3L0 296 aaPredicted RBP12.65□□□□□ -0.38
IFT20-216ENST00000588477 C16orf95Q9H693 158 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 ERVK-18Q9QC07 812 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 TMCC3Q9ULS5 477 aa12.65□□□□□ -0.38
IFT20-216ENST00000588477 IFI30P13284 250 aa12.64□□□□□ -0.39
IFT20-216ENST00000588477 FPR3P25089 353 aa12.64□□□□□ -0.39
IFT20-216ENST00000588477 OR1E2P47887 323 aa12.64□□□□□ -0.39
IFT20-216ENST00000588477 HOXA4Q00056 320 aaPredicted RBP12.64□□□□□ -0.39
IFT20-216ENST00000588477 LDLRAD3Q86YD5 345 aa12.64□□□□□ -0.39
IFT20-216ENST00000588477 PDZD9Q8IXQ8 264 aa12.64□□□□□ -0.39
IFT20-216ENST00000588477 OR51A7Q8NH64 312 aa12.64□□□□□ -0.39
IFT20-216ENST00000588477 OR10A6Q8NH74 314 aa12.64□□□□□ -0.39
IFT20-216ENST00000588477 RASD2Q96D21 266 aa12.64□□□□□ -0.39
IFT20-216ENST00000588477 BPIFA2Q96DR5 249 aa12.64□□□□□ -0.39
IFT20-216ENST00000588477 POLR2J2Q9GZM3 115 aaKnown RBP12.64□□□□□ -0.39
IFT20-216ENST00000588477 SIRPDQ9H106 197 aa12.64□□□□□ -0.39
IFT20-216ENST00000588477 POLR2J3Q9H1A7 115 aaKnown RBP12.64□□□□□ -0.39
IFT20-216ENST00000588477 DPAGT1Q9H3H5 408 aa12.64□□□□□ -0.39
IFT20-216ENST00000588477 KAT8Q9H7Z6 458 aaKnown RBP12.64□□□□□ -0.39
IFT20-216ENST00000588477 TMEM100Q9NV29 134 aa12.64□□□□□ -0.39
IFT20-216ENST00000588477 CTSZQ9UBR2 303 aa12.64□□□□□ -0.39
IFT20-216ENST00000588477 TRAV27A0A087WT01 109 aa12.63□□□□□ -0.39
IFT20-216ENST00000588477 ZNF816-ZNF321PA0A0X1KG74 233 aa12.63□□□□□ -0.39
IFT20-216ENST00000588477 OR6C6A6NF89 314 aa12.63□□□□□ -0.39
IFT20-216ENST00000588477 IQCF6A8MYZ5 107 aa12.63□□□□□ -0.39
IFT20-216ENST00000588477 J3QW42 95 aa12.63□□□□□ -0.39
IFT20-216ENST00000588477 GATA4P43694 442 aa12.63□□□□□ -0.39
IFT20-216ENST00000588477 RGS6P49758 472 aa12.63□□□□□ -0.39
IFT20-216ENST00000588477 ARF6P62330 175 aa12.63□□□□□ -0.39
IFT20-216ENST00000588477 MAB21L1Q13394 359 aa12.63□□□□□ -0.39
IFT20-216ENST00000588477 AQP6Q13520 282 aa12.63□□□□□ -0.39
IFT20-216ENST00000588477 CCDC92Q53HC0 331 aaPredicted RBP12.63□□□□□ -0.39
IFT20-216ENST00000588477 KPRPQ5T749 579 aaPredicted RBP12.63□□□□□ -0.39
IFT20-216ENST00000588477 SAMD5Q5TGI4 173 aa12.63□□□□□ -0.39
IFT20-216ENST00000588477 SFRP4Q6FHJ7 346 aaPredicted RBP12.63□□□□□ -0.39
IFT20-216ENST00000588477 DHRS7BQ6IAN0 325 aaPredicted RBP12.63□□□□□ -0.39
IFT20-216ENST00000588477 CCDC80Q76M96 950 aa12.63□□□□□ -0.39
IFT20-216ENST00000588477 PNLDC1Q8NA58 520 aaKnown RBP12.63□□□□□ -0.39
IFT20-216ENST00000588477 OR11L1Q8NGX0 322 aa12.63□□□□□ -0.39
IFT20-216ENST00000588477 OR1F12Q8NHA8 337 aa12.63□□□□□ -0.39
IFT20-216ENST00000588477 LRRC8CQ8TDW0 803 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms