RNA–Protein interactions for RNA: ENST00000580002.5

SHMT1-207, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2

Gene SHMT1, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-207ENST00000580002 TMED9Q9BVK6 235 aa21.91■■□□□ 1.1
SHMT1-207ENST00000580002 TIMM10BQ9Y5J6 103 aa21.91■■□□□ 1.1
SHMT1-207ENST00000580002 CCDC160A6NGH7 325 aa21.9■■□□□ 1.1
SHMT1-207ENST00000580002 A8MXE2 369 aa21.9■■□□□ 1.1
SHMT1-207ENST00000580002 ZNF878C9JN71 531 aa21.9■■□□□ 1.1
SHMT1-207ENST00000580002 SYNGR3O43761 229 aa21.9■■□□□ 1.1
SHMT1-207ENST00000580002 GNLYP22749 145 aa21.9■■□□□ 1.1
SHMT1-207ENST00000580002 OPRM1P35372 400 aa21.9■■□□□ 1.1
SHMT1-207ENST00000580002 MAGEB1P43366 347 aa21.9■■□□□ 1.1
SHMT1-207ENST00000580002 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.9■■□□□ 1.1
SHMT1-207ENST00000580002 RDH10Q8IZV5 341 aa21.9■■□□□ 1.1
SHMT1-207ENST00000580002 MRPL48Q96GC5 212 aaKnown RBP21.9■■□□□ 1.1
SHMT1-207ENST00000580002 PGLYRP3Q96LB9 341 aa21.9■■□□□ 1.1
SHMT1-207ENST00000580002 GTF2A1LQ9UNN4 478 aa21.9■■□□□ 1.1
SHMT1-207ENST00000580002 N6AMT1Q9Y5N5 214 aa21.9■■□□□ 1.1
SHMT1-207ENST00000580002 GPX5O75715 221 aa21.89■■□□□ 1.1
SHMT1-207ENST00000580002 BDH1Q02338 343 aa21.89■■□□□ 1.1
SHMT1-207ENST00000580002 FAM27E3Q08E93 113 aa21.89■■□□□ 1.1
SHMT1-207ENST00000580002 TAF13Q15543 124 aa21.89■■□□□ 1.1
SHMT1-207ENST00000580002 WDR38Q5JTN6 314 aa21.89■■□□□ 1.1
SHMT1-207ENST00000580002 BEND4Q6ZU67 534 aa21.89■■□□□ 1.1
SHMT1-207ENST00000580002 WDR31Q8NA23 367 aa21.89■■□□□ 1.1
SHMT1-207ENST00000580002 OR2G2Q8NGZ5 317 aa21.89■■□□□ 1.1
SHMT1-207ENST00000580002 NDUFB11Q9NX14 153 aa21.89■■□□□ 1.1
SHMT1-207ENST00000580002 B3GNT2Q9NY97 397 aa21.89■■□□□ 1.1
SHMT1-207ENST00000580002 ZNF629Q9UEG4 869 aaPredicted RBP21.89■■□□□ 1.1
SHMT1-207ENST00000580002 TRBV2A0A0J9YWF9 115 aa21.89■■□□□ 1.09
SHMT1-207ENST00000580002 SH3BGRP55822 239 aaPredicted RBP21.89■■□□□ 1.09
SHMT1-207ENST00000580002 RAB1AP62820 205 aa21.89■■□□□ 1.09
SHMT1-207ENST00000580002 HGFACQ04756 655 aa21.89■■□□□ 1.09
SHMT1-207ENST00000580002 STAC2Q6ZMT1 411 aa21.89■■□□□ 1.09
SHMT1-207ENST00000580002 IL17RDQ8NFM7 739 aa21.89■■□□□ 1.09
SHMT1-207ENST00000580002 PRR7Q8TB68 274 aa21.89■■□□□ 1.09
SHMT1-207ENST00000580002 GHSRQ92847 366 aa21.89■■□□□ 1.09
SHMT1-207ENST00000580002 ATF6BQ99941 703 aa21.89■■□□□ 1.09
SHMT1-207ENST00000580002 C1QTNF6Q9BXI9 259 aa21.89■■□□□ 1.09
SHMT1-207ENST00000580002 KCNN2Q9H2S1 579 aa21.89■■□□□ 1.09
SHMT1-207ENST00000580002 DDX28Q9NUL7 540 aaKnown RBP21.89■■□□□ 1.09
SHMT1-207ENST00000580002 F5H5K5 113 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 PLPP2O43688 288 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 AGFG2O95081 481 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 CCL2P13500 99 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 CRYBB2P43320 205 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 ADORA2A-AS1P86434 159 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 SCRN3Q0VDG4 424 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 ALKBH1Q13686 389 aaKnown RBP21.88■■□□□ 1.09
SHMT1-207ENST00000580002 CDSNQ15517 529 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 TMEM211Q6ICI0 200 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 RPL22L1Q6P5R6 122 aaKnown RBP21.88■■□□□ 1.09
SHMT1-207ENST00000580002 DEGS2Q6QHC5 323 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 MDP1Q86V88 176 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 ANKRD13BQ86YJ7 626 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 ISOC1Q96CN7 298 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 MS4A3Q96HJ5 214 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 CHCHD6Q9BRQ6 235 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 HDHD5Q9BXW7 423 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 G6PC2Q9NQR9 355 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 FAM206AQ9NX38 181 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 ZNF319Q9P2F9 582 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 ENPP5Q9UJA9 477 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 ESPL1Q14674 2120 aa21.88■■□□□ 1.09
SHMT1-207ENST00000580002 MSTNO14793 375 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 ZNF254O75437 659 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 ZFPL1O95159 310 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 APEX1P27695 318 aaKnown RBP21.87■■□□□ 1.09
SHMT1-207ENST00000580002 TGM4P49221 684 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 GDI2P50395 445 aaKnown RBP21.87■■□□□ 1.09
SHMT1-207ENST00000580002 FABP5Q01469 135 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 RAB35Q15286 201 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 CTF1Q16619 201 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 SLC36A2Q495M3 483 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 SYT9Q86SS6 491 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 MYPOPQ86VE0 399 aaPredicted RBP21.87■■□□□ 1.09
SHMT1-207ENST00000580002 P2RY8Q86VZ1 359 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 ZNF584Q8IVC4 421 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 OR10AC1Q8NH08 325 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 OR1F12Q8NHA8 337 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 RPS4Y2Q8TD47 263 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 RGP1Q92546 391 aaPredicted RBP21.87■■□□□ 1.09
SHMT1-207ENST00000580002 R4GMQ9 66 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 SMIM31A0A1B0GVY4 71 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 TMEM269A0A1B0GVZ9 245 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 OR6C6A6NF89 314 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 HSD11B1P28845 292 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 TTKP33981 857 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 PCBD1P61457 104 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 TGFBR3Q03167 851 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 C22orf34Q6ZV56 151 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 BHLHA15Q7RTS1 189 aaPredicted RBP21.87■■□□□ 1.09
SHMT1-207ENST00000580002 CATSPERDQ86XM0 798 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 SMIM19Q96E16 107 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 C4orf45Q96LM5 186 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 ZNF75AQ96N20 296 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 CENPOQ9BU64 300 aa21.87■■□□□ 1.09
SHMT1-207ENST00000580002 LOC100509620A0A075B734 347 aa21.86■■□□□ 1.09
SHMT1-207ENST00000580002 LOC100506127A0A0U1RQW1 187 aa21.86■■□□□ 1.09
SHMT1-207ENST00000580002 OR4C45A6NMZ5 311 aa21.86■■□□□ 1.09
SHMT1-207ENST00000580002 CELA3BP08861 270 aa21.86■■□□□ 1.09
SHMT1-207ENST00000580002 CRYGSP22914 178 aa21.86■■□□□ 1.09
SHMT1-207ENST00000580002 HTR5AP47898 357 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms