RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 CENPAP49450 140 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 CRISP1P54107 249 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 HIST1H3AP68431 136 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 EFNB1P98172 346 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 SNTB2Q13425 540 aaKnown RBP8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 KEAP1Q14145 624 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 PTGES3Q15185 160 aaKnown RBP8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 SLC36A2Q495M3 483 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 C1QTNF12Q5T7M4 302 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 HIST2H3PS2Q5TEC6 136 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 SLC27A4Q6P1M0 643 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 HIST2H3AQ71DI3 136 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 SSX8Q7RTT4 187 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 DTX2Q86UW9 622 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 HIPK1Q86Z02 1210 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 ZNF101Q8IZC7 436 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 PARP8Q8N3A8 854 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 SLC30A7Q8NEW0 376 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 OR10S1Q8NGN2 331 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 TMEM171Q8WVE6 324 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 MBD6Q96DN6 1003 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 RAB3IPQ96QF0 476 aaPredicted RBP8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 SLC29A1Q99808 456 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 DHRS9Q9BPW9 319 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 BDH2Q9BUT1 245 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 CXXC4Q9H2H0 198 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 POFUT1Q9H488 388 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 RNF121Q9H920 327 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 WDR76Q9H967 626 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 HINT3Q9NQE9 182 aaKnown RBP8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 KRT84Q9NSB2 600 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 KIF17Q9P2E2 1029 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 MYEF2Q9P2K5 600 aaKnown RBP8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 POU2F3Q9UKI9 436 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 FKBP7Q9Y680 259 aa8.14□□□□□ -1.11
NPLOC4-219ENST00000576713 C5orf63A6NC05 138 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 OR6C6A6NF89 314 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 ZAR1LA6NP61 321 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 SYNGR3O43761 229 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 PRKYO43930 277 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 NGFP01138 241 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 ALPLP05186 524 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 OR4A8P0C604 315 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 FCGR1AP12314 374 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 NR2C1P13056 603 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 SLC2A5P22732 501 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 NR4A1P22736 598 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 IGFBP5P24593 272 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 DNASE1P24855 282 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 CRABP1P29762 137 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 FABP6P51161 128 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 ART1P52961 327 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 HSF2Q03933 536 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 XP32Q5T750 250 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 C12orf73Q69YU5 71 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 SLC18B1Q6NT16 456 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 ZFP1Q6P2D0 407 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 TMEM53Q6P2H8 277 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 PLBD1Q6P4A8 553 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 RFPL4BQ6ZWI9 263 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 ZCCHC24Q8N2G6 241 aaKnown RBP8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 PQLC1Q8N2U9 271 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 MUC15Q8N387 334 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 SVOPLQ8N434 492 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 CBR4Q8N4T8 237 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 NUP37Q8NFH4 326 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 PROKR2Q8NFJ6 384 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 PERPQ96FX8 193 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 AMELYQ99218 206 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 ZNF556Q9HAH1 456 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 CCNB1IP1Q9NPC3 277 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 PNRC2Q9NPJ4 139 aaKnown RBP8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 CYB5R1Q9UHQ9 305 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 BAIAP2Q9UQB8 552 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 COMMD3-BMI1R4GMX3 469 aa8.13□□□□□ -1.11
NPLOC4-219ENST00000576713 NF1P21359 2839 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 FLNAP21333 2647 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 C5orf49A4QMS7 147 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 CCDC182A6NF36 153 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 RIIAD1A6NNX1 92 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 C12orf71A8MTZ7 269 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 DLGAP1O14490 977 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 RRP9O43818 475 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 SMPD2O60906 423 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 LY6HO94772 140 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 SNAP29O95721 258 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 CLPTM1O96005 669 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 IGHV4-39P01824 125 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 CCNOP22674 350 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 STOMP27105 288 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 PTH2RP49190 550 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 ARHGDIAP52565 204 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 SLC25A1P53007 311 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 LSM6P62312 80 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 HNRNPA0Q13151 305 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 AQP6Q13520 282 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 DAG1Q14118 895 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 SPATA46Q5T0L3 261 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 SLX4IPQ5VYV7 408 aa8.12□□□□□ -1.11
NPLOC4-219ENST00000576713 TMEM154Q6P9G4 183 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms