RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 HDAC3O15379 428 aa13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 MLNRO43193 412 aa13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 DOK2O60496 412 aa13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 OPN1SWP03999 348 aa13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 SCG5P05408 212 aa13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 FBP1P09467 338 aa13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 COX5BP10606 129 aa13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 HOXB9P17482 250 aaPredicted RBP13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 MSR1P21757 451 aa13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 NSUN5P1Q3KNT7 163 aa13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 DEFB121Q5J5C9 76 aa13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 SFRP4Q6FHJ7 346 aaPredicted RBP13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 TSPYL5Q86VY4 417 aaPredicted RBP13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 MSRB3Q8IXL7 192 aa13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 EIF1ADQ8N9N8 165 aaKnown RBP13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 BOLLQ8N9W6 283 aaKnown RBP13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 PFN4Q8NHR9 129 aa13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 EMC7Q9NPA0 242 aa13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 SDR39U1Q9NRG7 319 aaPredicted RBP13.41□□□□□ -0.26
CTDNEP1-211ENST00000575783 ELOVL7A1L3X0 281 aa13.4□□□□□ -0.26
CTDNEP1-211ENST00000575783 SGCEO43556 437 aa13.4□□□□□ -0.26
CTDNEP1-211ENST00000575783 OR7A10O76100 309 aa13.4□□□□□ -0.26
CTDNEP1-211ENST00000575783 HLA-DPB1P04440 258 aa13.4□□□□□ -0.26
CTDNEP1-211ENST00000575783 FOXB2Q5VYV0 432 aa13.4□□□□□ -0.26
CTDNEP1-211ENST00000575783 SYT9Q86SS6 491 aa13.4□□□□□ -0.26
CTDNEP1-211ENST00000575783 GPR32P1Q8NGA4 272 aa13.4□□□□□ -0.26
CTDNEP1-211ENST00000575783 OR4D11Q8NGI4 311 aa13.4□□□□□ -0.26
CTDNEP1-211ENST00000575783 OR11L1Q8NGX0 322 aa13.4□□□□□ -0.26
CTDNEP1-211ENST00000575783 WWC2-AS2Q96NR7 200 aa13.4□□□□□ -0.26
CTDNEP1-211ENST00000575783 ZNF426Q9BUY5 554 aa13.4□□□□□ -0.26
CTDNEP1-211ENST00000575783 ALG12Q9BV10 488 aa13.4□□□□□ -0.26
CTDNEP1-211ENST00000575783 TXNIPQ9H3M7 391 aa13.4□□□□□ -0.26
CTDNEP1-211ENST00000575783 TMEM38AQ9H6F2 299 aa13.4□□□□□ -0.26
CTDNEP1-211ENST00000575783 UFSP2Q9NUQ7 469 aa13.4□□□□□ -0.26
CTDNEP1-211ENST00000575783 ZNRD1Q9P1U0 126 aa13.4□□□□□ -0.26
CTDNEP1-211ENST00000575783 CAB39Q9Y376 341 aaPredicted RBP13.4□□□□□ -0.26
CTDNEP1-211ENST00000575783 A0A1W2PRD5 423 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 A0A1W2PRF3 423 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 A0A1W2PRM7 423 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 UBDO15205 165 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 ADAM20O43506 726 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 MT-ND1P03886 318 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 PRB3Q04118 309 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 SCRN3Q0VDG4 424 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 FOXL2NBQ6ZUU3 175 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 BTN2A1Q7KYR7 527 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 VMO1Q7Z5L0 202 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 KLHDC1Q8N7A1 406 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 OR4S1Q8NGB4 309 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 CFHR4Q92496 578 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 SGTBQ96EQ0 304 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 PAIP2Q9BPZ3 127 aaKnown RBP13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 PRSS27Q9BQR3 290 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 ROPN1BQ9BZX4 212 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 ROPN1Q9HAT0 212 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 SMURF1Q9HCE7 757 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 POLE4Q9NR33 117 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 TMEM100Q9NV29 134 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 DNAJB11Q9UBS4 358 aa13.39□□□□□ -0.27
CTDNEP1-211ENST00000575783 RNASEK-C17orf49H0YIS7 233 aa13.38□□□□□ -0.27
CTDNEP1-211ENST00000575783 M0QX08 132 aa13.38□□□□□ -0.27
CTDNEP1-211ENST00000575783 OR10H3O60404 316 aa13.38□□□□□ -0.27
CTDNEP1-211ENST00000575783 FAM20BO75063 409 aa13.38□□□□□ -0.27
CTDNEP1-211ENST00000575783 CD247P20963 164 aa13.38□□□□□ -0.27
CTDNEP1-211ENST00000575783 PPIBP23284 216 aaKnown RBP13.38□□□□□ -0.27
CTDNEP1-211ENST00000575783 FPR3P25089 353 aa13.38□□□□□ -0.27
CTDNEP1-211ENST00000575783 EFNB2P52799 333 aa13.38□□□□□ -0.27
CTDNEP1-211ENST00000575783 KCNJ8Q15842 424 aa13.38□□□□□ -0.27
CTDNEP1-211ENST00000575783 FBXW12Q6X9E4 464 aa13.38□□□□□ -0.27
CTDNEP1-211ENST00000575783 OR5L1Q8NGL2 311 aa13.38□□□□□ -0.27
CTDNEP1-211ENST00000575783 PPP1R35Q8TAP8 253 aa13.38□□□□□ -0.27
CTDNEP1-211ENST00000575783 MMP28Q9H239 520 aa13.38□□□□□ -0.27
CTDNEP1-211ENST00000575783 IKZF5Q9H5V7 419 aa13.38□□□□□ -0.27
CTDNEP1-211ENST00000575783 WDR76Q9H967 626 aa13.38□□□□□ -0.27
CTDNEP1-211ENST00000575783 C20orf141Q9NUB4 165 aa13.38□□□□□ -0.27
CTDNEP1-211ENST00000575783 EPPK1P58107 5090 aaKnown RBP13.38□□□□□ -0.27
CTDNEP1-211ENST00000575783 K7EIL1 84 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 PAHP00439 452 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 VIMP08670 466 aaKnown RBP13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 DBHP09172 617 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 VSIG10L2P0DP72 767 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 RPL27P61353 136 aaKnown RBP13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 MAB21L1Q13394 359 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 OR8B8Q15620 311 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 MPPED2Q15777 294 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 ALG10Q5BKT4 473 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 CLEC12AQ5QGZ9 265 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 LRIF1Q5T3J3 769 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 PRAMEF6Q5VXH4 476 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 OTPQ5XKR4 325 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 IGFN1Q86VF2 1251 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 NKAIN4Q8IVV8 208 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 SPERTQ8NA61 448 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 PCYOX1LQ8NBM8 494 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 FNDC8Q8TC99 324 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 TMEM255BQ8WV15 326 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 RASD2Q96D21 266 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 R3HDM4Q96D70 268 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 PCDHAC1Q9H158 963 aa13.37□□□□□ -0.27
CTDNEP1-211ENST00000575783 CNTD2Q9H8S5 307 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms