RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 C1QTNF5Q9BXJ0 243 aa7.38□□□□□ -1.23
SMG6-216ENST00000575176 NDEL1Q9GZM8 345 aa7.38□□□□□ -1.23
SMG6-216ENST00000575176 HDHD2Q9H0R4 259 aa7.38□□□□□ -1.23
SMG6-216ENST00000575176 MMADHCQ9H3L0 296 aaPredicted RBP7.38□□□□□ -1.23
SMG6-216ENST00000575176 SRA1Q9HD15 236 aaKnown RBP7.38□□□□□ -1.23
SMG6-216ENST00000575176 HINT3Q9NQE9 182 aaKnown RBP7.38□□□□□ -1.23
SMG6-216ENST00000575176 DCAF16Q9NXF7 216 aa7.38□□□□□ -1.23
SMG6-216ENST00000575176 NKIRAS2Q9NYR9 191 aa7.38□□□□□ -1.23
SMG6-216ENST00000575176 PDP1Q9P0J1 537 aaPredicted RBP7.38□□□□□ -1.23
SMG6-216ENST00000575176 NDRG4Q9ULP0 352 aaKnown RBP7.38□□□□□ -1.23
SMG6-216ENST00000575176 KLHDC2Q9Y2U9 406 aa7.38□□□□□ -1.23
SMG6-216ENST00000575176 STARD10Q9Y365 291 aa7.38□□□□□ -1.23
SMG6-216ENST00000575176 CACNG2Q9Y698 323 aa7.38□□□□□ -1.23
SMG6-216ENST00000575176 PMF1-BGLAPU3KQ54 211 aa7.38□□□□□ -1.23
SMG6-216ENST00000575176 ARHGAP32A7KAX9 2087 aa7.38□□□□□ -1.23
SMG6-216ENST00000575176 LOC390937A0A1W2PQ73 354 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 INAFM1C9JVW0 142 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 J3QW42 95 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 M0R129 80 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 MLNRO43193 412 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 CD5LO43866 347 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 MITFO75030 526 aaPredicted RBP7.37□□□□□ -1.23
SMG6-216ENST00000575176 RENP00797 406 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 PTHP01270 115 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 LCKP06239 509 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 CD55P08174 381 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 OSMP13725 252 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 DAOP14920 347 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 ZNF16P17020 682 aaPredicted RBP7.37□□□□□ -1.23
SMG6-216ENST00000575176 COL8A2P25067 703 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 PRSS12P56730 875 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 DSCR9P59020 149 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 ACTR3P61158 418 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 MRPS11P82912 194 aaKnown RBP7.37□□□□□ -1.23
SMG6-216ENST00000575176 PLP2Q04941 152 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 KRTAP21-3Q3LHN1 58 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 TEX30Q5JUR7 227 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 C6orf52Q5T4I8 152 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 KDM4DQ6B0I6 523 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 DNM1P34Q6PK57 102 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 FBXW12Q6X9E4 464 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 NAA40Q86UY6 237 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 PRIMA1Q86XR5 153 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 ZNF511Q8NB15 262 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 OR1J2Q8NGS2 313 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 SYNPRQ8TBG9 265 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 NEU4Q8WWR8 484 aaPredicted RBP7.37□□□□□ -1.23
SMG6-216ENST00000575176 LRTOMTQ8WZ04 291 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 NRBF2Q96F24 287 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 SIGLEC11Q96RL6 698 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 VRK1Q99986 396 aaPredicted RBP7.37□□□□□ -1.23
SMG6-216ENST00000575176 RERGLQ9H628 205 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 MYOZ1Q9NP98 299 aaPredicted RBP7.37□□□□□ -1.23
SMG6-216ENST00000575176 PLEK2Q9NYT0 353 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 TAAR3PQ9P1P4 343 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 KCNG2Q9UJ96 466 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 BAIAP2Q9UQB8 552 aa7.37□□□□□ -1.23
SMG6-216ENST00000575176 STAB1Q9NY15 2570 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 ZAR1LA6NP61 321 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 DEAF1O75398 565 aaPredicted RBP7.36□□□□□ -1.23
SMG6-216ENST00000575176 ATP5HO75947 161 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 ABHD16AO95870 558 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 ZNF23P17027 643 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 CCNOP22674 350 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 RAD52P43351 418 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 PDLIM4P50479 330 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 CDK5R2Q13319 367 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 GINS1Q14691 196 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 HLXQ14774 488 aaPredicted RBP7.36□□□□□ -1.23
SMG6-216ENST00000575176 SNAI3Q3KNW1 292 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 KLHL12Q53G59 568 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 TMEM236Q5W0B7 351 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 C12orf73Q69YU5 71 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 SLC27A4Q6P1M0 643 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.36□□□□□ -1.23
SMG6-216ENST00000575176 RFLNBQ8N5W9 214 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 GJC3Q8NFK1 279 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 OR2T4Q8NH00 348 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 DCLRE1CQ96SD1 692 aaKnown RBP7.36□□□□□ -1.23
SMG6-216ENST00000575176 ATF6BQ99941 703 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 RHNO1Q9BSD3 238 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 GABARAPL3Q9BY60 117 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 DYNLRB1Q9NP97 96 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 ZNF275Q9NSD4 429 aaPredicted RBP7.36□□□□□ -1.23
SMG6-216ENST00000575176 DUSP13Q9UII6 198 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 PURGQ9UJV8 347 aaKnown RBP7.36□□□□□ -1.23
SMG6-216ENST00000575176 FBXO9Q9UK97 447 aaPredicted RBP7.36□□□□□ -1.23
SMG6-216ENST00000575176 SPEF1Q9Y4P9 236 aa7.36□□□□□ -1.23
SMG6-216ENST00000575176 A0A1W2PPW3 197 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 LRP5LA4QPB2 252 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 PRKYO43930 277 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 BMP4P12644 408 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 ANXA8P13928 327 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 ACHEP22303 614 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 USF1P22415 310 aaPredicted RBP7.35□□□□□ -1.23
SMG6-216ENST00000575176 IGFBP5P24593 272 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 ENTPD1P49961 510 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 LMO4P61968 165 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 CCL8P80075 99 aa7.35□□□□□ -1.23
SMG6-216ENST00000575176 KPNB1Q14974 876 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms