RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 TRIM64BA6NI03 449 aa11□□□□□ -0.65
CDT1-203ENST00000569140 ZAR1LA6NP61 321 aa11□□□□□ -0.65
CDT1-203ENST00000569140 SMAD7O15105 426 aaKnown RBP11□□□□□ -0.65
CDT1-203ENST00000569140 PRODHO43272 600 aa11□□□□□ -0.65
CDT1-203ENST00000569140 TLX2O43763 284 aaPredicted RBP11□□□□□ -0.65
CDT1-203ENST00000569140 PRKYO43930 277 aa11□□□□□ -0.65
CDT1-203ENST00000569140 SELENOFO60613 162 aa11□□□□□ -0.65
CDT1-203ENST00000569140 MT-ND5P03915 603 aa11□□□□□ -0.65
CDT1-203ENST00000569140 MRPL3P09001 348 aaKnown RBP11□□□□□ -0.65
CDT1-203ENST00000569140 NAT2P11245 290 aa11□□□□□ -0.65
CDT1-203ENST00000569140 PSKH1P11801 424 aa11□□□□□ -0.65
CDT1-203ENST00000569140 CD99P14209 185 aa11□□□□□ -0.65
CDT1-203ENST00000569140 EPHA2P29317 976 aa11□□□□□ -0.65
CDT1-203ENST00000569140 POLR2IP36954 125 aaKnown RBP11□□□□□ -0.65
CDT1-203ENST00000569140 MPV17P39210 176 aa11□□□□□ -0.65
CDT1-203ENST00000569140 ALDH3A2P51648 485 aa11□□□□□ -0.65
CDT1-203ENST00000569140 EFNA4P52798 201 aa11□□□□□ -0.65
CDT1-203ENST00000569140 RAD23AP54725 363 aa11□□□□□ -0.65
CDT1-203ENST00000569140 ECH1Q13011 328 aa11□□□□□ -0.65
CDT1-203ENST00000569140 LINC01590Q5TEZ4 76 aa11□□□□□ -0.65
CDT1-203ENST00000569140 LCN1P1Q5VSP4 162 aa11□□□□□ -0.65
CDT1-203ENST00000569140 SLX4IPQ5VYV7 408 aa11□□□□□ -0.65
CDT1-203ENST00000569140 CLEC2AQ6UVW9 174 aa11□□□□□ -0.65
CDT1-203ENST00000569140 KRTAP1-3Q8IUG1 177 aa11□□□□□ -0.65
CDT1-203ENST00000569140 IPCEF1Q8WWN9 437 aaPredicted RBP11□□□□□ -0.65
CDT1-203ENST00000569140 SPTSSAQ969W0 71 aa11□□□□□ -0.65
CDT1-203ENST00000569140 SLAMF6Q96DU3 332 aa11□□□□□ -0.65
CDT1-203ENST00000569140 MAP6Q96JE9 813 aa11□□□□□ -0.65
CDT1-203ENST00000569140 DOK1Q99704 481 aa11□□□□□ -0.65
CDT1-203ENST00000569140 GABARAPL3Q9BY60 117 aa11□□□□□ -0.65
CDT1-203ENST00000569140 FBXO9Q9UK97 447 aaPredicted RBP11□□□□□ -0.65
CDT1-203ENST00000569140 PLSCR5A0PG75 271 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 TPD52L2O43399 206 aaKnown RBP10.99□□□□□ -0.65
CDT1-203ENST00000569140 TIMM8AO60220 97 aaPredicted RBP10.99□□□□□ -0.65
CDT1-203ENST00000569140 HSD11B1P28845 292 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 RGS6P49758 472 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 TPTEP56180 551 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 CDC42P60953 191 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 HIST1H3AP68431 136 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 RCN1Q15293 331 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 MOGQ16653 247 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 SLC35D3Q5M8T2 416 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 HIST2H3PS2Q5TEC6 136 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 C12orf73Q69YU5 71 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 PRSS57Q6UWY2 283 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 ZBTB49Q6ZSB9 765 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 HIST2H3AQ71DI3 136 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 DPY19L4Q7Z388 723 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 BCDIN3DQ7Z5W3 292 aaKnown RBP10.99□□□□□ -0.65
CDT1-203ENST00000569140 ZNF525Q8N782 197 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 KLF14Q8TD94 323 aaPredicted RBP10.99□□□□□ -0.65
CDT1-203ENST00000569140 DCLRE1CQ96SD1 692 aaKnown RBP10.99□□□□□ -0.65
CDT1-203ENST00000569140 POFUT1Q9H488 388 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 TBCCD1Q9NVR7 557 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 IMPAD1Q9NX62 359 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 SLCO1C1Q9NYB5 712 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 ATPIF1Q9UII2 106 aa10.99□□□□□ -0.65
CDT1-203ENST00000569140 ROS1P08922 2347 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 ZNF878C9JN71 531 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 H7C1Q1 480 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 M0R135 149 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 LCATP04180 440 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 ALPLP05186 524 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 ZNF250P15622 560 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 EVX1P49640 407 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 PRKXP51817 358 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 LRRC36Q1X8D7 754 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 SHFQ7M4L6 423 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 C1orf174Q8IYL3 243 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 ZNF283Q8N7M2 679 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 OR5L1Q8NGL2 311 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 OR10S1Q8NGN2 331 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 FAM81AQ8TBF8 368 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 TMEM163Q8TC26 289 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 THEM6Q8WUY1 208 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 GTF3AQ92664 365 aaKnown RBP10.98□□□□□ -0.65
CDT1-203ENST00000569140 APOBEC3DQ96AK3 386 aaPredicted RBP10.98□□□□□ -0.65
CDT1-203ENST00000569140 ZNF799Q96GE5 643 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 MARS2Q96GW9 593 aaKnown RBP10.98□□□□□ -0.65
CDT1-203ENST00000569140 COG8Q96MW5 612 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 RHNO1Q9BSD3 238 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 TTTY10Q9BZA0 68 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 MS4A5Q9H3V2 200 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 TOR3AQ9H497 397 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 PNRC2Q9NPJ4 139 aaKnown RBP10.98□□□□□ -0.65
CDT1-203ENST00000569140 USE1Q9NZ43 259 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 DNAJC27Q9NZQ0 273 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 STARD10Q9Y365 291 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 SPG11Q96JI7 2443 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 NAV2Q8IVL1 2488 aa10.98□□□□□ -0.65
CDT1-203ENST00000569140 TBX1O43435 398 aa10.97□□□□□ -0.65
CDT1-203ENST00000569140 SPRY3O43610 288 aa10.97□□□□□ -0.65
CDT1-203ENST00000569140 F12P00748 615 aaPredicted RBP10.97□□□□□ -0.65
CDT1-203ENST00000569140 LYNP07948 512 aa10.97□□□□□ -0.65
CDT1-203ENST00000569140 H2BFMP0C1H6 154 aa10.97□□□□□ -0.65
CDT1-203ENST00000569140 ACSM4P0C7M7 580 aa10.97□□□□□ -0.65
CDT1-203ENST00000569140 SLC2A1P11166 492 aa10.97□□□□□ -0.65
CDT1-203ENST00000569140 SLC2A5P22732 501 aa10.97□□□□□ -0.65
CDT1-203ENST00000569140 SLC15A1P46059 708 aa10.97□□□□□ -0.65
CDT1-203ENST00000569140 GRB2P62993 217 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms