RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, human

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-223	ENST00000569050	HOXA4	Q00056	320 aa	Predicted RBP	13.92	□□□□□ -0.18
PKM-223	ENST00000569050	CD47	Q08722	323 aa		13.92	□□□□□ -0.18
PKM-223	ENST00000569050	NPTX1	Q15818	432 aa		13.92	□□□□□ -0.18
PKM-223	ENST00000569050	REEP3	Q6NUK4	255 aa		13.92	□□□□□ -0.18
PKM-223	ENST00000569050	SLC25A47	Q6Q0C1	308 aa		13.92	□□□□□ -0.18
PKM-223	ENST00000569050	HIST3H2A	Q7L7L0	130 aa		13.92	□□□□□ -0.18
PKM-223	ENST00000569050	HDDC2	Q7Z4H3	204 aa		13.92	□□□□□ -0.18
PKM-223	ENST00000569050	KRT73	Q86Y46	540 aa		13.92	□□□□□ -0.18
PKM-223	ENST00000569050	C1orf87	Q8N0U7	546 aa		13.92	□□□□□ -0.18
PKM-223	ENST00000569050	LYG1	Q8N1E2	194 aa		13.92	□□□□□ -0.18
PKM-223	ENST00000569050	HIST1H2AC	Q93077	130 aa		13.92	□□□□□ -0.18
PKM-223	ENST00000569050	PAIP1	Q9H074	479 aa	Known RBP	13.92	□□□□□ -0.18
PKM-223	ENST00000569050	RMND5A	Q9H871	391 aa		13.92	□□□□□ -0.18
PKM-223	ENST00000569050	TUBG2	Q9NRH3	451 aa		13.92	□□□□□ -0.18
PKM-223	ENST00000569050	SLC13A4	Q9UKG4	626 aa		13.92	□□□□□ -0.18
PKM-223	ENST00000569050	TMCC3	Q9ULS5	477 aa		13.92	□□□□□ -0.18
PKM-223	ENST00000569050	BTBD17	A6NE02	478 aa		13.91	□□□□□ -0.18
PKM-223	ENST00000569050	CPSF4L	A6NMK7	179 aa	Known RBP	13.91	□□□□□ -0.18
PKM-223	ENST00000569050	MLNR	O43193	412 aa		13.91	□□□□□ -0.18
PKM-223	ENST00000569050	SLC22A3	O75751	556 aa		13.91	□□□□□ -0.18
PKM-223	ENST00000569050	NPY4R	P50391	375 aa		13.91	□□□□□ -0.18
PKM-223	ENST00000569050	CDK6	Q00534	326 aa		13.91	□□□□□ -0.18
PKM-223	ENST00000569050	ENDOG	Q14249	297 aa	Known RBP	13.91	□□□□□ -0.18
PKM-223	ENST00000569050	GCNT6	Q5T4J0	391 aa		13.91	□□□□□ -0.18
PKM-223	ENST00000569050	CD276	Q5ZPR3	534 aa		13.91	□□□□□ -0.18
PKM-223	ENST00000569050	TTC33	Q6PID6	262 aa	Predicted RBP	13.91	□□□□□ -0.18
PKM-223	ENST00000569050	MSANTD1	Q6ZTZ1	278 aa		13.91	□□□□□ -0.18
PKM-223	ENST00000569050	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.91	□□□□□ -0.18
PKM-223	ENST00000569050	SIKE1	Q9BRV8	207 aa		13.91	□□□□□ -0.18
PKM-223	ENST00000569050	RAD21L1	Q9H4I0	556 aa		13.91	□□□□□ -0.18
PKM-223	ENST00000569050	SMURF1	Q9HCE7	757 aa		13.91	□□□□□ -0.18
PKM-223	ENST00000569050	SDR39U1	Q9NRG7	319 aa	Predicted RBP	13.91	□□□□□ -0.18
PKM-223	ENST00000569050	ZIM2	Q9NZV7	527 aa		13.91	□□□□□ -0.18
PKM-223	ENST00000569050	FAM96B	Q9Y3D0	163 aa		13.91	□□□□□ -0.18
PKM-223	ENST00000569050	PRORSD1P	A6NEY8	169 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050		F5H5P2	479 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050	AQP1	P29972	269 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050	AQP2	P41181	271 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050	PCBD1	P61457	104 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050	ARF6	P62330	175 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050	ENTPD8	Q5MY95	495 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050	OR2T2	Q6IF00	324 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050	C1orf122	Q6ZSJ8	110 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050	FOXL2NB	Q6ZUU3	175 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050	KLHDC1	Q8N7A1	406 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050	CLDN22	Q8N7P3	220 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050	PNLDC1	Q8NA58	520 aa	Known RBP	13.9	□□□□□ -0.18
PKM-223	ENST00000569050	SMYD1	Q8NB12	490 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050	GTF2H4	Q92759	462 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050	ZNF426	Q9BUY5	554 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050	PPA2	Q9H2U2	334 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.9	□□□□□ -0.18
PKM-223	ENST00000569050	MEPE	Q9NQ76	525 aa	Predicted RBP	13.9	□□□□□ -0.18
PKM-223	ENST00000569050	INIP	Q9NRY2	104 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050	ANGPT4	Q9Y264	503 aa		13.9	□□□□□ -0.18
PKM-223	ENST00000569050	ANKRD61	A6NGH8	418 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	RNASEK-C17orf49	H0YIS7	233 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	FBP1	P09467	338 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	COX5B	P10606	129 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	RAC2	P15153	192 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	HTR5A	P47898	357 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	POLR2J	P52435	117 aa	Known RBP	13.89	□□□□□ -0.19
PKM-223	ENST00000569050	NSUN5P1	Q3KNT7	163 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	SLC2A7	Q6PXP3	512 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	ARMC8	Q8IUR7	673 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	OR8G5	Q8NG78	346 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	OR4S1	Q8NGB4	309 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	OR6T1	Q8NGN1	323 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	OR13G1	Q8NGZ3	307 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	MOSPD2	Q8NHP6	518 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	PPP1R35	Q8TAP8	253 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	ADAMTS16	Q8TE57	1224 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	PTP4A1	Q93096	173 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	MMP28	Q9H239	520 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	SLC25A37	Q9NYZ2	338 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	CCDC167	Q9P0B6	97 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	STX18	Q9P2W9	335 aa	Known RBP	13.89	□□□□□ -0.19
PKM-223	ENST00000569050	ERVK-18	Q9QC07	812 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	SLC7A7	Q9UM01	511 aa		13.89	□□□□□ -0.19
PKM-223	ENST00000569050	GMNC	A6NCL1	334 aa		13.88	□□□□□ -0.19
PKM-223	ENST00000569050	DOK2	O60496	412 aa		13.88	□□□□□ -0.19
PKM-223	ENST00000569050	SCG5	P05408	212 aa		13.88	□□□□□ -0.19
PKM-223	ENST00000569050	SCARB2	Q14108	478 aa		13.88	□□□□□ -0.19
PKM-223	ENST00000569050	AGK	Q53H12	422 aa		13.88	□□□□□ -0.19
PKM-223	ENST00000569050	CLEC12A	Q5QGZ9	265 aa		13.88	□□□□□ -0.19
PKM-223	ENST00000569050	C1orf94	Q6P1W5	598 aa		13.88	□□□□□ -0.19
PKM-223	ENST00000569050	RBM45	Q8IUH3	476 aa	Known RBP	13.88	□□□□□ -0.19
PKM-223	ENST00000569050	MSRB3	Q8IXL7	192 aa		13.88	□□□□□ -0.19
PKM-223	ENST00000569050	OR4D11	Q8NGI4	311 aa		13.88	□□□□□ -0.19
PKM-223	ENST00000569050	SLC7A6	Q92536	515 aa		13.88	□□□□□ -0.19
PKM-223	ENST00000569050	NSRP1	Q9H0G5	558 aa	Known RBP	13.88	□□□□□ -0.19
PKM-223	ENST00000569050	EVA1A	Q9H8M9	152 aa		13.88	□□□□□ -0.19
PKM-223	ENST00000569050	PTTG3P	Q9NZH4	202 aa		13.88	□□□□□ -0.19
PKM-223	ENST00000569050		A0A1W2PPL8	197 aa		13.87	□□□□□ -0.19
PKM-223	ENST00000569050	FAM20B	O75063	409 aa		13.87	□□□□□ -0.19
PKM-223	ENST00000569050	FCN3	O75636	299 aa		13.87	□□□□□ -0.19
PKM-223	ENST00000569050	IRF2	P14316	349 aa		13.87	□□□□□ -0.19
PKM-223	ENST00000569050	MSR1	P21757	451 aa		13.87	□□□□□ -0.19
PKM-223	ENST00000569050	GATA4	P43694	442 aa		13.87	□□□□□ -0.19
PKM-223	ENST00000569050	VMO1	Q7Z5L0	202 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms