RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 IDH1O75874 414 aaKnown RBP0.71□□□□□ -2.3
CDH1-211ENST00000567320 GLSO94925 669 aaPredicted RBP0.71□□□□□ -2.3
CDH1-211ENST00000567320 LCA5LO95447 670 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 IFNB1P01574 187 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 RPN2P04844 631 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 CTSLP07711 333 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 CD28P10747 220 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 CHMLP26374 656 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 MDH1P40925 334 aaKnown RBP0.71□□□□□ -2.3
CDH1-211ENST00000567320 SYNJ2BPP57105 145 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 YWHAGP61981 247 aaKnown RBP eCLIP0.71□□□□□ -2.3
CDH1-211ENST00000567320 PPIL2Q13356 520 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 QPRTQ15274 297 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 CNSTQ6PJW8 725 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 CDR2LQ86X02 465 aaPredicted RBP0.71□□□□□ -2.3
CDH1-211ENST00000567320 OR11H7Q8NGC8 314 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 OR1J4Q8NGS1 313 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 ACTL9Q8TC94 416 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 UBE2Q2Q8WVN8 375 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 DCPSQ96C86 337 aaKnown RBP0.71□□□□□ -2.3
CDH1-211ENST00000567320 TRIM62Q9BVG3 475 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 TPPP3Q9BW30 176 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 DSN1Q9H410 356 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 ING4Q9UNL4 249 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 GOLT1BQ9Y3E0 138 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 NPTNQ9Y639 398 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 VWDEQ8N2E2 1590 aa0.7□□□□□ -2.3
CDH1-211ENST00000567320 PRR14LQ5THK1 2151 aa0.7□□□□□ -2.3
CDH1-211ENST00000567320 NVLO15381 856 aaKnown RBP0.7□□□□□ -2.3
CDH1-211ENST00000567320 PSTPIP1O43586 416 aa0.7□□□□□ -2.3
CDH1-211ENST00000567320 EIF4EP06730 217 aaKnown RBP0.7□□□□□ -2.3
CDH1-211ENST00000567320 SSR1P43307 286 aaKnown RBP0.7□□□□□ -2.3
CDH1-211ENST00000567320 RND2P52198 227 aa0.7□□□□□ -2.3
CDH1-211ENST00000567320 GFERP55789 205 aa0.7□□□□□ -2.3
CDH1-211ENST00000567320 CYP24A1Q07973 514 aa0.7□□□□□ -2.3
CDH1-211ENST00000567320 TICAM2Q86XR7 235 aa0.7□□□□□ -2.3
CDH1-211ENST00000567320 PDIK1LQ8N165 341 aa0.7□□□□□ -2.3
CDH1-211ENST00000567320 ZNF645Q8N7E2 425 aa0.7□□□□□ -2.3
CDH1-211ENST00000567320 TRIM44Q96DX7 344 aaPredicted RBP0.7□□□□□ -2.3
CDH1-211ENST00000567320 SLC17A7Q9P2U7 560 aa0.7□□□□□ -2.3
CDH1-211ENST00000567320 ODF2LQ9ULJ1 636 aa0.7□□□□□ -2.3
CDH1-211ENST00000567320 VANGL2Q9ULK5 521 aa0.7□□□□□ -2.3
CDH1-211ENST00000567320 CHTOPQ9Y3Y2 248 aaKnown RBP0.7□□□□□ -2.3
CDH1-211ENST00000567320 PALLDQ8WX93 1383 aa0.7□□□□□ -2.3
CDH1-211ENST00000567320 ZNF208O43345 1280 aa0.69□□□□□ -2.3
CDH1-211ENST00000567320 ZNF73O43830 326 aaPredicted RBP0.69□□□□□ -2.3
CDH1-211ENST00000567320 OR7C2O60412 319 aa0.69□□□□□ -2.3
CDH1-211ENST00000567320 ERGP11308 486 aa0.69□□□□□ -2.3
CDH1-211ENST00000567320 GRIA1P42261 906 aa0.69□□□□□ -2.3
CDH1-211ENST00000567320 FGL1Q08830 312 aa0.69□□□□□ -2.3
CDH1-211ENST00000567320 SOHLH1Q5JUK2 328 aa0.69□□□□□ -2.3
CDH1-211ENST00000567320 ANKRD26P1Q6NSI1 321 aa0.69□□□□□ -2.3
CDH1-211ENST00000567320 ERO1BQ86YB8 467 aa0.69□□□□□ -2.3
CDH1-211ENST00000567320 LINC00469Q8N7U9 141 aa0.69□□□□□ -2.3
CDH1-211ENST00000567320 FAM83FQ8NEG4 500 aaPredicted RBP0.69□□□□□ -2.3
CDH1-211ENST00000567320 OR2Z1Q8NG97 314 aa0.69□□□□□ -2.3
CDH1-211ENST00000567320 OR4M1Q8NGD0 313 aa0.69□□□□□ -2.3
CDH1-211ENST00000567320 PSKH2Q96QS6 385 aa0.69□□□□□ -2.3
CDH1-211ENST00000567320 PTBP2Q9UKA9 531 aaKnown RBP0.69□□□□□ -2.3
CDH1-211ENST00000567320 ADAM28Q9UKQ2 775 aa0.69□□□□□ -2.3
CDH1-211ENST00000567320 KCNE3Q9Y6H6 103 aa0.69□□□□□ -2.3
CDH1-211ENST00000567320 CNTNAP1P78357 1384 aa0.69□□□□□ -2.3
CDH1-211ENST00000567320 ATP10AO60312 1499 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 C15orf65H3BRN8 121 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 K7EQM0 130 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 SYNGR2O43760 224 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 CLIC3O95833 236 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 IQCF3P0C7M6 154 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 TALDO1P37837 337 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 MAGEA8P43361 318 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 CCT3P49368 545 aaKnown RBP0.68□□□□□ -2.3
CDH1-211ENST00000567320 CMC4P56277 68 aaPredicted RBP0.68□□□□□ -2.3
CDH1-211ENST00000567320 GPX6P59796 221 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 IL5RAQ01344 420 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 BTN1A1Q13410 526 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 CHRNA6Q15825 494 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 NADK2Q4G0N4 442 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 RIPPLY2Q5TAB7 128 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 ZNF660Q6AZW8 331 aaPredicted RBP0.68□□□□□ -2.3
CDH1-211ENST00000567320 OR10AD1Q8NGE0 317 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 SCFD1Q8WVM8 642 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 PIBF1Q8WXW3 757 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 OR2V2Q96R30 315 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 SLC2A8Q9NY64 477 aa0.68□□□□□ -2.3
CDH1-211ENST00000567320 IGLV1-36A0A0B4J1U3 117 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 CLDN34H7C241 214 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 K7EMT4 169 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 PALMO75781 387 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 GATBO75879 557 aaKnown RBP0.67□□□□□ -2.3
CDH1-211ENST00000567320 MMP7P09237 267 aaPredicted RBP0.67□□□□□ -2.3
CDH1-211ENST00000567320 THRAP10827 490 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 RBM34P42696 430 aaKnown RBP0.67□□□□□ -2.3
CDH1-211ENST00000567320 SIGLEC14Q08ET2 396 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 LUZP6Q538Z0 58 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 ZNF470Q6ECI4 717 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 FAM131AQ6UXB0 335 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 TCF24Q7RTU0 167 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 NAA40Q86UY6 237 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 PSTKQ8IV42 348 aaKnown RBP0.67□□□□□ -2.3
CDH1-211ENST00000567320 OR2T34Q8NGX1 318 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms