RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 NDRG4Q9ULP0 352 aaKnown RBP11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 BAIAP2Q9UQB8 552 aa11.63□□□□□ -0.55
VPS9D1-204ENST00000565023 PLSCR5A0PG75 271 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 H3BNX3 289 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 DCTN6O00399 190 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 WNT9BO14905 357 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 RER1O15258 196 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 TIMM8AO60220 97 aaPredicted RBP11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 MT-ND5P03915 603 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 TACSTD2P09758 323 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 ACHEP22303 614 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 MVKQ03426 396 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 AQP6Q13520 282 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 MOGQ16653 247 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 SLC36A3Q495N2 470 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 ZFP1Q6P2D0 407 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 FAHD1Q6P587 224 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 DNM1P34Q6PK57 102 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 UNQ6126/PRO20091Q6UXV3 157 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 USP51Q70EK9 711 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 VASH1Q7L8A9 365 aaPredicted RBP11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 AMIGO2Q86SJ2 522 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 SYT9Q86SS6 491 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 C10orf67Q8IYJ2 551 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 ATG16L2Q8NAA4 619 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 NPEPL1Q8NDH3 523 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 SDR9C7Q8NEX9 313 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 OR2T33Q8NG76 320 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 OR4Q3Q8NH05 313 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 CLDND2Q8NHS1 167 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 DDOQ99489 341 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 ZNF556Q9HAH1 456 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 MSL2Q9HCI7 577 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 RPRD1BQ9NQG5 326 aaKnown RBP11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 CDC42EP3Q9UKI2 254 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 CACNG2Q9Y698 323 aa11.62□□□□□ -0.55
VPS9D1-204ENST00000565023 OR6C68A6NDL8 312 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 ZSCAN5BA6NJL1 495 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 G3V2T6 193 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 IFNA2P01563 188 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 IGHV3-13P01766 116 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 HLA-DQA2P01906 255 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 DBHP09172 617 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 OSMP13725 252 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 CRABP1P29762 137 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 DAPP51397 102 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 HNRNPA0Q13151 305 aaKnown RBP11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 CCDC92Q53HC0 331 aaPredicted RBP11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 FAM120AOSQ5T036 256 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 CORO6Q6QEF8 472 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 ARL9Q6T311 187 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 ZBTB46Q86UZ6 589 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 ZDHHC13Q8IUH4 622 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 LINC00346Q8IVM7 164 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 OR6V1Q8N148 313 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 OR52E2Q8NGJ4 325 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 TEX47Q8TBZ9 253 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 DNAJC9Q8WXX5 260 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 CENPNQ96H22 339 aaPredicted RBP11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 RACGAP1Q9H0H5 632 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 GABARAPL1Q9H0R8 117 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 SAP30LQ9HAJ7 183 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 B9D1Q9UPM9 204 aa11.61□□□□□ -0.55
VPS9D1-204ENST00000565023 IGLV1-36A0A0B4J1U3 117 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 IGHV1-69-2A0A0G2JMI3 117 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 H3BN98 237 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 IGHV1-46P01743 117 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 FAM157CP0CG43 387 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 RBMXP38159 391 aaKnown RBP11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 LSM6P62312 80 aaKnown RBP11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 KCNMB1Q16558 191 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 ZSCAN26Q16670 478 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 CR1LQ2VPA4 569 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 PCGF3Q3KNV8 242 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 SPRNQ5BIV9 151 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 MBNL2Q5VZF2 373 aaKnown RBP11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 OR5AS1Q8N127 324 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 PARP8Q8N3A8 854 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 LINC01356Q8N9X3 169 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 CYB561A3Q8NBI2 242 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 OR1F12Q8NHA8 337 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 SPATA3Q8NHX4 192 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 PKP2Q99959 881 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 WACQ9BTA9 647 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 PAPOLBQ9NRJ5 636 aaKnown RBP11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 PTTG3PQ9NZH4 202 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 LPAR3Q9UBY5 353 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 STARD10Q9Y365 291 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 MXRA5Q9NR99 2828 aa11.6□□□□□ -0.55
VPS9D1-204ENST00000565023 DYSFO75923 2080 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 FAM157AC9JC47 383 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 RP2O75695 350 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 GAAP10253 952 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 COX5BP10606 129 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 SRD5A1P18405 259 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 HNF1AP20823 631 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 PYCR1P32322 319 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 GRK5P34947 590 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 MMP15P51511 669 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms