RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 MEGF11A6BM72 1044 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 FAM172BPA6NC97 362 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 GPANK1O95872 356 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 PDGFBP01127 241 aaPredicted RBP6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 IGHEP01854 428 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 TCRBP04435 133 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 CD2P06729 351 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 SPARCP09486 303 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF883P0CG24 379 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 GSTT2BP0CG30 244 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 CD37P11049 281 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 HLA-DOBP13765 273 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 ADRA2CP18825 462 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 ERP29P30040 261 aaKnown RBP6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 BTCP35070 178 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 RPS27P42677 84 aaKnown RBP6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 KIR3DL2P43630 455 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 SOX2P48431 317 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 DGCR2P98153 550 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 EIF2B1Q14232 305 aaKnown RBP6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 MELKQ14680 651 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 ETFDHQ16134 617 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 NDUFA5Q16718 116 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 KRBOX4Q5JUW0 171 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 NHLRC1Q6VVB1 395 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 NOXA1Q86UR1 476 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 CATSPERDQ86XM0 798 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 SYNPRQ8TBG9 265 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 POC1BQ8TC44 478 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 ZBTB8AQ96BR9 441 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC25A38Q96DW6 304 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 DNAJA3Q96EY1 480 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 C5orf34Q96MH7 638 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 NPAS1Q99742 590 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 CACNG6Q9BXT2 260 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 AKIRIN1Q9H9L7 192 aaPredicted RBP6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 G6PC2Q9NQR9 355 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 MYO15AQ9UKN7 3530 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 A0A1B0GTH9 108 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 C7orf66A4D0T2 115 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 A8MXE2 369 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 EFNA2O43921 213 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 SMPD2O60906 423 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 KLF7O75840 302 aaPredicted RBP6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 KRT33AO76009 404 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 CD3GP09693 182 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 FSTP19883 344 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 GDNFP39905 211 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 MAGEB1P43366 347 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 POU3F1Q03052 451 aaPredicted RBP6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 TLE1Q04724 770 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 MYBPHQ13203 477 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 KLF9Q13886 244 aaPredicted RBP6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 TMEM244Q5VVB8 128 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 ZNF704Q6ZNC4 412 aaPredicted RBP6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 DBX2Q6ZNG2 339 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 DNM1P46Q6ZS02 220 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 SIAH3Q8IW03 269 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 GLB1L2Q8IW92 636 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 CCDC28AQ8IWP9 274 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 ARMC10Q8N2F6 343 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 KDM8Q8N371 416 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 OR2Y1Q8NGV0 311 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 FCAMRQ8WWV6 532 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 ASB5Q8WWX0 329 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 AKAP1Q92667 903 aaKnown RBP eCLIP6.46□□□□□ -1.381e-6■□□□□ 9.6
HERPUD1-209ENST00000564678 MR1Q95460 341 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 ORAI1Q96D31 301 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 SCMH1Q96GD3 660 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 MRPL13Q9BYD1 178 aaKnown RBP6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 TMPRSS13Q9BYE2 586 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 NELFAQ9H3P2 528 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 NIPAL2Q9H841 368 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 RANGRFQ9HD47 186 aaPredicted RBP6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 SLC17A5Q9NRA2 495 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 CKLFQ9UBR5 152 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 FBLN5Q9UBX5 448 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 CLEC4AQ9UMR7 237 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 RBMX2Q9Y388 322 aaKnown RBP6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 LRP12Q9Y561 859 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 CHCHD2Q9Y6H1 151 aaPredicted RBP6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 R4GMQ9 66 aa6.46□□□□□ -1.38
HERPUD1-209ENST00000564678 PATE3B3GLJ2 98 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 ACOT7O00154 380 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 XRCC3O43542 346 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 SRSF10O75494 262 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 PNPP00491 289 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 MAS1P04201 325 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 ZNF28P17035 718 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 CSRP1P21291 193 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 ACP1P24666 158 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 PTH2RP49190 550 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 SRP9P49458 86 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 CAPZA1P52907 286 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 MRPS15P82914 257 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 MAB21L1Q13394 359 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 BCL2A1Q16548 175 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 TMEM69Q5SWH9 247 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 LCE2DQ5TA82 110 aaPredicted RBP6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 GLT8D1Q68CQ7 371 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms