RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 V9GY05 133 aa6.6□□□□□ -1.35
MAP1LC3B-205ENST00000564638 SPTBN1Q01082 2364 aaKnown RBP6.6□□□□□ -1.35
MAP1LC3B-205ENST00000564638 DNAJC13O75165 2243 aa6.6□□□□□ -1.35
MAP1LC3B-205ENST00000564638 ESPL1Q14674 2120 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 PHF3Q92576 2039 aaKnown RBP6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 A0A0B4J203 849 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 LOC102725191A0A1B0GVB3 256 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 CLEC18AA5D8T8 446 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 ZNF726A6NNF4 738 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 LYRM1O43325 122 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 NME2P1O60361 137 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 EIF1BO60739 113 aaKnown RBP6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 SLC43A1O75387 559 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 UBL3O95164 117 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 VAMP5O95183 116 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 OPN1LWP04000 364 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 CD2P06729 351 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 H2BFMP0C1H6 154 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 PGA4P0DJD7 388 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 PGA3P0DJD8 388 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 CALCBP10092 127 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 HOXB1P14653 301 aaPredicted RBP6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 ACHEP22303 614 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 NME2P22392 152 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 SRD5A2P31213 254 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 RFC3P40938 356 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 MEOX1P50221 254 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 P2RY4P51582 365 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 PLGLB1Q02325 96 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 MFGE8Q08431 387 aaPredicted RBP6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 CAMK2DQ13557 499 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 TOMM20Q15388 145 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 PCK2Q16822 640 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 AGAP6Q5VW22 663 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 RSBN1Q5VWQ0 802 aaPredicted RBP6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 DEGS2Q6QHC5 323 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 KLHL24Q6TFL4 600 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 PLET1Q6UQ28 207 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 CLEC18BQ6UXF7 455 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 STAC2Q6ZMT1 411 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 ZNF704Q6ZNC4 412 aaPredicted RBP6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 DCXRQ7Z4W1 244 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 MDGA2Q7Z553 956 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 SYT9Q86SS6 491 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 CATSPERDQ86XM0 798 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 LINC00346Q8IVM7 164 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 PRSS35Q8N3Z0 413 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 CELF2-AS1Q8N7Q2 184 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 CLEC18CQ8NCF0 446 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 OR5H6Q8NGV6 325 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 OR2AJ1Q8NGZ0 328 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 CHAC2Q8WUX2 184 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 C11orf40Q8WZ69 217 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 HPS1Q92902 700 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 ZDHHC16Q969W1 377 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 TMEM106AQ96A25 262 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 NTNG2Q96CW9 530 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 SNRNP40Q96DI7 357 aaKnown RBP6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 SLC25A44Q96H78 314 aaPredicted RBP6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 ZC3HAV1LQ96H79 300 aaKnown RBP6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 KCNJ15Q99712 375 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 EMC6Q9BV81 110 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 ASF1BQ9NVP2 202 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 RBFOX1Q9NWB1 397 aaKnown RBP6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 CKLFQ9UBR5 152 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 DHDHQ9UQ10 334 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 CAMK2AQ9UQM7 478 aa6.59□□□□□ -1.35
MAP1LC3B-205ENST00000564638 ZNF407Q9C0G0 2248 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 NCKAP5O14513 1909 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 A0A0G2JMM0 328 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 A0A1B0GTH9 108 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 FAM240BA0A1B0GVZ2 78 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 LOC107986453A0A1B0GWG9 222 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 A0A1W2PPB8 328 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 A0A1W2PRS3 328 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 OR2M5A3KFT3 312 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 KIR3DP1A8MWS1 328 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 NPIPA2E9PIF3 369 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 NPIPA3F8WFD2 350 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 CDK2AP1O14519 115 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 TFECO14948 347 aaPredicted RBP6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 PLA2G10O15496 165 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 EEF1E1O43324 174 aaKnown RBP6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 DNPH1O43598 174 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 MPZL1O95297 269 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 WNT11O96014 354 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 UBCP0CG48 685 aaKnown RBP6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 TRAPPC2P0DI81 140 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 TRAPPC2BP0DI82 140 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 FSTP19883 344 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 CSNK1A1P48729 337 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 DNASE1L1P49184 302 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 EIF2B2P49770 351 aaKnown RBP6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 TPTEP56180 551 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 CLDN17P56750 224 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 SCAND1P57086 179 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 RAC1P63000 192 aa6.58□□□□□ -1.36
MAP1LC3B-205ENST00000564638 POU4F3Q15319 338 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms