RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 ACHEP22303 614 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 ZNF81P51508 661 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 SLC25A1P53007 311 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 CRMP1Q14194 572 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 GGTLC2Q14390 218 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 TMEM249Q2WGJ8 235 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 ALKBH6Q3KRA9 238 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 ZNF362Q5T0B9 420 aaPredicted RBP11.45□□□□□ -0.58
CLK3-216ENST00000564468 SPATA46Q5T0L3 261 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 SLC27A4Q6P1M0 643 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 SHQ1Q6PI26 577 aaKnown RBP11.45□□□□□ -0.58
CLK3-216ENST00000564468 TMEM179BQ7Z7N9 219 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 ATG16L2Q8NAA4 619 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 OR4Q3Q8NH05 313 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 PTP4A1Q93096 173 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 PITX2Q99697 317 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 RBM4Q9BWF3 364 aaKnown RBP11.45□□□□□ -0.58
CLK3-216ENST00000564468 CHODLQ9H9P2 273 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 CMC2Q9NRP2 79 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 DECR2Q9NUI1 292 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 KIF17Q9P2E2 1029 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 CYB5R1Q9UHQ9 305 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 ZDHHC8Q9ULC8 765 aa11.45□□□□□ -0.58
CLK3-216ENST00000564468 DYSFO75923 2080 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 SONP18583 2426 aaKnown RBP11.44□□□□□ -0.58
CLK3-216ENST00000564468 TPD52L2O43399 206 aaKnown RBP11.44□□□□□ -0.58
CLK3-216ENST00000564468 TIMM8AO60220 97 aaPredicted RBP11.44□□□□□ -0.58
CLK3-216ENST00000564468 HPXP02790 462 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 HMGN1P05114 100 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 FCGR1AP12314 374 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 FASP25445 335 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 POU1F1P28069 291 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 PYCR1P32322 319 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 MPV17P39210 176 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 GZMKP49863 264 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 ERFP50548 548 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 TMEM33P57088 247 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 OTPQ5XKR4 325 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 CYB5R2Q6BCY4 276 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 SLC18B1Q6NT16 456 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 CORO6Q6QEF8 472 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 CCDC121Q6ZUS5 278 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 APOBEC3DQ96AK3 386 aaPredicted RBP11.44□□□□□ -0.58
CLK3-216ENST00000564468 SLCO4A1Q96BD0 722 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 BPESC1Q9GZL8 116 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 EGLN1Q9GZT9 426 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 STARD10Q9Y365 291 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 TANC2Q9HCD6 1990 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 MXRA5Q9NR99 2828 aa11.44□□□□□ -0.58
CLK3-216ENST00000564468 TIPRLO75663 272 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 ADH4P08319 380 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 RAC2P15153 192 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 ZNF23P17027 643 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 SPI1P17947 270 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 GGT2P36268 569 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 ENTPD1P49961 510 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 MMP15P51511 669 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 CHN2P52757 468 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 TPTEP56180 551 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 CCL8P80075 99 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 KRTAP1-1Q07627 177 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 RIN1Q13671 783 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 GINS1Q14691 196 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 HIPK1Q86Z02 1210 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 LINC00346Q8IVM7 164 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 OR9Q1Q8NGQ5 310 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 OR5K1Q8NHB7 308 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 SLC7A6Q92536 515 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 SPTSSAQ969W0 71 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 DUS3LQ96G46 650 aaKnown RBP11.43□□□□□ -0.58
CLK3-216ENST00000564468 PLEKHA8Q96JA3 519 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 ATF6BQ99941 703 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 NMNAT2Q9BZQ4 307 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 SAP30LQ9HAJ7 183 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 MRPL22Q9NWU5 206 aaKnown RBP11.43□□□□□ -0.58
CLK3-216ENST00000564468 AP4S1Q9Y587 144 aa11.43□□□□□ -0.58
CLK3-216ENST00000564468 TVP23AA6NH52 213 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 INAFM1C9JVW0 142 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 PRR23D1E9PI22 279 aaPredicted RBP11.42□□□□□ -0.58
CLK3-216ENST00000564468 DBHP09172 617 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 TACSTD2P09758 323 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 PRR23D2P0DMB1 279 aaPredicted RBP11.42□□□□□ -0.58
CLK3-216ENST00000564468 KITLGP21583 273 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 PRKACGP22612 351 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 TNFSF4P23510 183 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 CRYBB2P43320 205 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 MAGEB1P43366 347 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 GPR6P46095 362 aaPredicted RBP11.42□□□□□ -0.58
CLK3-216ENST00000564468 PSG7Q13046 419 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 ATP6AP1Q15904 470 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 TEX30Q5JUR7 227 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 FBXW12Q6X9E4 464 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 CFAP77Q6ZQR2 320 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 HS3ST5Q8IZT8 346 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 OR51L1Q8NGJ5 315 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 OR6K6Q8NGW6 343 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 UTP4Q969X6 686 aaKnown RBP11.42□□□□□ -0.58
CLK3-216ENST00000564468 OTULINQ96BN8 352 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 HAVCR1Q96D42 359 aa11.42□□□□□ -0.58
CLK3-216ENST00000564468 ELMOD3Q96FG2 381 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms