RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 KDM8Q8N371 416 aa8.26□□□□□ -1.09
HDGFL3-204ENST00000563790 SLC22A24Q8N4F4 322 aa8.26□□□□□ -1.09
HDGFL3-204ENST00000563790 ST8SIA4Q92187 359 aa8.26□□□□□ -1.09
HDGFL3-204ENST00000563790 TSPYL1Q9H0U9 437 aa8.26□□□□□ -1.09
HDGFL3-204ENST00000563790 EXOSC3Q9NQT5 275 aaKnown RBP8.26□□□□□ -1.09
HDGFL3-204ENST00000563790 EIF3KQ9UBQ5 218 aaKnown RBP8.26□□□□□ -1.09
HDGFL3-204ENST00000563790 FAF1Q9UNN5 650 aaPredicted RBP8.26□□□□□ -1.09
HDGFL3-204ENST00000563790 H3BSH0 61 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 J3QW42 95 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 AKAP8O43823 692 aaKnown RBP8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 PSPNO60542 156 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 KRT16P08779 473 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 CCNOP22674 350 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 SRP9P49458 86 aaKnown RBP8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 EWSR1Q01844 656 aaKnown RBP eCLIP8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 GALNTL6Q49A17 601 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 LCNL1Q6ZST4 164 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 DPPA2Q7Z7J5 298 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 PATL1Q86TB9 770 aaKnown RBP8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 CLECL1Q8IZS7 167 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 LINC00528Q8N1L1 170 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 OR6Q1Q8NGQ2 317 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 OIT3Q8WWZ8 545 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 CNOT9Q92600 299 aaKnown RBP8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 CHMP6Q96FZ7 201 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 TAPBPLQ9BX59 468 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 B3GAT2Q9NPZ5 323 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 ABCB10Q9NRK6 738 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 DCDC2Q9UHG0 476 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 CAPN7Q9Y6W3 813 aa8.25□□□□□ -1.09
HDGFL3-204ENST00000563790 FSIP2Q5CZC0 6907 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 LRP1Q07954 4544 aaKnown RBP8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 M0R1W7 72 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 FAAHO00519 579 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 ICMTO60725 284 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 FZD7O75084 574 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 ENTPD5O75356 428 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 AK1P00568 194 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 FAM153BP0C7A2 387 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 IRF2P14316 349 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 KITLGP21583 273 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 RPS4Y1P22090 263 aaKnown RBP8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 AZGP1P25311 298 aaKnown RBP8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 CASQ1P31415 396 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 HPCAL1P37235 193 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 OR3A4PP47883 348 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 FAM153CQ494X1 144 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 C6orf136Q5SQH8 315 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 C6orf120Q7Z4R8 191 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 HMGN2P46Q86SG4 172 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 C10orf107Q8IVU9 208 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 FGFRL1Q8N441 504 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 HIPK4Q8NE63 616 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 ABHD4Q8TB40 342 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 TWIST2Q8WVJ9 160 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 IFT81Q8WYA0 676 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 MOAP1Q96BY2 351 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 SH3GL3Q99963 347 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 C1orf50Q9BV19 199 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 GRPEL1Q9HAV7 217 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 PSMC3IPQ9P2W1 217 aaPredicted RBP8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 SLC35A3Q9Y2D2 325 aa8.24□□□□□ -1.09
HDGFL3-204ENST00000563790 KRTAP29-1A8MX34 341 aaPredicted RBP8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 MS4A18H0YCH9 400 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 LGALS8O00214 317 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 NPIPB7O75200 414 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 SERPINE1P05121 402 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 CPA3P15088 417 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 MATN1P21941 496 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 MAPK1P28482 360 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 IDH2P48735 452 aaKnown RBP8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 KCNJ10P78508 379 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 MAPK11Q15759 364 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 MRGPRG-AS1Q2M3A8 158 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 CCDC153Q494R4 210 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 CFAP157Q5JU67 520 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 CARD17Q5XLA6 110 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 LINC00322Q6ZN03 302 aaPredicted RBP8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 TRMT10CQ7L0Y3 403 aaKnown RBP8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 DYNAPQ8N1N2 210 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 OR10AD1Q8NGE0 317 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 Q8TCH9 128 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 PNPT1Q8TCS8 783 aaKnown RBP8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 PHLDA1Q8WV24 401 aaPredicted RBP8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 WDR89Q96FK6 387 aaPredicted RBP8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 POM121L2Q96KW2 1035 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 OXGR1Q96P68 337 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 DUSP26Q9BV47 211 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 ULBP2Q9BZM5 246 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 SLC38A1Q9H2H9 487 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 OR51I1Q9H343 314 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 DCLRE1BQ9H816 532 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 POLE3Q9NRF9 147 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 KAAG1Q9UBP8 84 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 FIS1Q9Y3D6 152 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 CEPT1Q9Y6K0 416 aa8.23□□□□□ -1.09
HDGFL3-204ENST00000563790 WDR91A4D1P6 747 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 DUXAA6NLW8 204 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 CCRL2O00421 344 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 PEX11AO75192 247 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 194.3 ms