RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 CHP2O43745 196 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 FAM20BO75063 409 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 CH25HO95992 272 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 TSPAN19P0C672 248 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 FAM153BP0C7A2 387 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 HOXB9P17482 250 aaPredicted RBP6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 HOXD3P31249 432 aaPredicted RBP6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 NME5P56597 212 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 LRRC74AQ0VAA2 488 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 KLRD1Q13241 179 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 HABP2Q14520 560 aaPredicted RBP6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 C11orf91Q3C1V1 193 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 CEP85LQ5SZL2 805 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 OR2T2Q6IF00 324 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 OGFOD2Q6N063 350 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 ARL9Q6T311 187 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 FBXW12Q6X9E4 464 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 SYT9Q86SS6 491 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 RANBP3LQ86VV4 465 aaPredicted RBP6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 TSPYL5Q86VY4 417 aaPredicted RBP6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 NUDCD3Q8IVD9 361 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 PNKDQ8N490 385 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 ZNF781Q8N8C0 355 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 MUC7Q8TAX7 377 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 NSMAFQ92636 917 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 RCC1LQ96I51 464 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 ZNF426Q9BUY5 554 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 CENPHQ9H3R5 247 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 CACYBPQ9HB71 228 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 TMEM27Q9HBJ8 222 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 NANSQ9NR45 359 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 SIRT7Q9NRC8 400 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 AIG1Q9NVV5 245 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 THUMPD1Q9NXG2 353 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 ZNF229Q9UJW7 825 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 NDRG4Q9ULP0 352 aaKnown RBP6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 PYCARDQ9ULZ3 195 aa6.28□□□□□ -1.4
HERPUD1-206ENST00000563343 A0A1W2PRD5 423 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 A0A1W2PRF3 423 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 A0A1W2PRM7 423 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 IQCF6A8MYZ5 107 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 E9PQ18 207 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 LGALS8O00214 317 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 DVL1O14640 695 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 HDAC3O15379 428 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 ECDO95905 644 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 RGS8P57771 180 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 SLC35A2P78381 396 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 CD83Q01151 205 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 RPL18Q07020 188 aaKnown RBP6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 RGNQ15493 299 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 MPPED2Q15777 294 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 NPTX1Q15818 432 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 LY6EQ16553 131 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 HHATQ5VTY9 493 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 PRAMEF6Q5VXH4 476 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 SFRP4Q6FHJ7 346 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 ZNF613Q6PF04 617 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 RNF144BQ7Z419 303 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 CLDN22Q8N7P3 220 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 CELF2-AS1Q8N7Q2 184 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 PCYOX1LQ8NBM8 494 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 PIFOQ8TCI5 191 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 C17orf50Q8WW18 174 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 SLC7A6Q92536 515 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 ERGIC1Q969X5 290 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 APOPT1Q96IL0 206 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 MAP6Q96JE9 813 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 CLPTM1LQ96KA5 538 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 DMRTB1Q96MA1 342 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 COG8Q96MW5 612 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 SSX3Q99909 188 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 C20orf27Q9GZN8 174 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 MMADHCQ9H3L0 296 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 MEPEQ9NQ76 525 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 INPP5EQ9NRR6 644 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 SELENONQ9NZV5 590 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 KAAG1Q9UBP8 84 aa6.27□□□□□ -1.41
HERPUD1-206ENST00000563343 A0A1B0GW55 424 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 ELOVL7A1L3X0 281 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 MEIOCA2RUB1 952 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 WDR91A4D1P6 747 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 NPIPB13A6NJU9 1138 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 NPIPB4C9JG80 1138 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 MCIDASD6RGH6 385 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 BLOC1S5-TXNDC5H3BN57 136 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 FMO6PO60774 539 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 DUS4LO95620 317 aaKnown RBP6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 PTBP3O95758 552 aaKnown RBP6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 HLA-DPB1P04440 258 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 DUX4L2P0CJ85 424 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 DUX4L3P0CJ86 424 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 DUX4L4P0CJ87 422 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 DUX4L5P0CJ88 424 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 DUX4L6P0CJ89 424 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 DUX4L7P0CJ90 424 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 IRF2P14316 349 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 ZNF26P17031 533 aaPredicted RBP6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 LBPP18428 481 aa6.26□□□□□ -1.41
HERPUD1-206ENST00000563343 BGNP21810 368 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms