RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ALKBH6Q3KRA9 238 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 MBNL2Q5VZF2 373 aaKnown RBP7.31□□□□□ -1.24
UBR1-204ENST00000563239 C12orf73Q69YU5 71 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 TMEM154Q6P9G4 183 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 COLCA1Q6ZS62 124 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 BCDIN3DQ7Z5W3 292 aaKnown RBP7.31□□□□□ -1.24
UBR1-204ENST00000563239 NAA40Q86UY6 237 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 TIGD4Q8IY51 512 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 ZNF525Q8N782 197 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 ICA1LQ8NDH6 482 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 OR10H5Q8NGA6 315 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 ABHD4Q8TB40 342 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 SYNPRQ8TBG9 265 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 SLC25A40Q8TBP6 338 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 KLF14Q8TD94 323 aaPredicted RBP7.31□□□□□ -1.24
UBR1-204ENST00000563239 ST7LQ8TDW4 575 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 COX4I2Q96KJ9 171 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 GABARAPL3Q9BY60 117 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 OR2J1Q9GZK6 312 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 HDHD2Q9H0R4 259 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 OR51V1Q9H2C8 321 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 BARX1Q9HBU1 254 aaPredicted RBP7.31□□□□□ -1.24
UBR1-204ENST00000563239 TBCCD1Q9NVR7 557 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 TVP23BQ9NYZ1 205 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 EIF3KQ9UBQ5 218 aaKnown RBP7.31□□□□□ -1.24
UBR1-204ENST00000563239 DUSP13Q9UII6 198 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 POLR1DQ9Y2S0 133 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 STARD10Q9Y365 291 aa7.31□□□□□ -1.24
UBR1-204ENST00000563239 ABCA2Q9BZC7 2435 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 NIPBLQ6KC79 2804 aaeCLIP7.3□□□□□ -1.24
UBR1-204ENST00000563239 IGHV4-30-2A0A087WSY4 118 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 C5orf63A6NC05 138 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 CCDC182A6NF36 153 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 PRR23D1E9PI22 279 aaPredicted RBP7.3□□□□□ -1.24
UBR1-204ENST00000563239 H7C1Q1 480 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 ABHD16AO95870 558 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 ACSM4P0C7M7 580 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 PRR23D2P0DMB1 279 aaPredicted RBP7.3□□□□□ -1.24
UBR1-204ENST00000563239 NAT2P11245 290 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 BMP4P12644 408 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 FOSL1P15407 271 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 IGFBP5P24593 272 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 GSTT1P30711 240 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 OTX1P32242 354 aaPredicted RBP7.3□□□□□ -1.24
UBR1-204ENST00000563239 ENTPD1P49961 510 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 MMP15P51511 669 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 NUDT6P53370 316 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 KLF3P57682 345 aaPredicted RBP7.3□□□□□ -1.24
UBR1-204ENST00000563239 GABPB1Q06547 395 aaPredicted RBP7.3□□□□□ -1.24
UBR1-204ENST00000563239 PSG7Q13046 419 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 SNAPC1Q16533 368 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 AADACL4Q5VUY2 407 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 DMRTA1Q5VZB9 504 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 CXXC5Q7LFL8 322 aaKnown RBP7.3□□□□□ -1.24
UBR1-204ENST00000563239 DCXRQ7Z4W1 244 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 OR6K6Q8NGW6 343 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 OR2AJ1Q8NGZ0 328 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 IPCEF1Q8WWN9 437 aaPredicted RBP7.3□□□□□ -1.24
UBR1-204ENST00000563239 OTULINQ96BN8 352 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 ZMYND19Q96E35 227 aaPredicted RBP7.3□□□□□ -1.24
UBR1-204ENST00000563239 DCLRE1CQ96SD1 692 aaKnown RBP7.3□□□□□ -1.24
UBR1-204ENST00000563239 AMELYQ99218 206 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 PITX2Q99697 317 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 SLC29A1Q99808 456 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 ATF6BQ99941 703 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 SMR3AQ99954 134 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 VRK1Q99986 396 aaPredicted RBP7.3□□□□□ -1.24
UBR1-204ENST00000563239 CDADC1Q9BWV3 514 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 TPK1Q9H3S4 243 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 ELOVL3Q9HB03 270 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 DDX28Q9NUL7 540 aaKnown RBP7.3□□□□□ -1.24
UBR1-204ENST00000563239 USE1Q9NZ43 259 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 TAAR3PQ9P1P4 343 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 KLHDC2Q9Y2U9 406 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 GRIP1Q9Y3R0 1128 aa7.3□□□□□ -1.24
UBR1-204ENST00000563239 MED13LQ71F56 2210 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 A0A1W2PPW3 197 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 ZSCAN5BA6NJL1 495 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 VWC2LB2RUY7 222 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 RNF223E7ERA6 249 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 H3BSA7 217 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 M0R233 179 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 EI24O14681 340 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 PRODHO43272 600 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 TLX2O43763 284 aaPredicted RBP7.29□□□□□ -1.24
UBR1-204ENST00000563239 SELENOFO60613 162 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 NCR1O76036 304 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 HPXP02790 462 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 SPARCP09486 303 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 PAICSP22234 425 aaKnown RBP7.29□□□□□ -1.24
UBR1-204ENST00000563239 BLVRAP53004 296 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 KRTAP1-1Q07627 177 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 ECH1Q13011 328 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 APOFQ13790 326 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 HLXQ14774 488 aaPredicted RBP7.29□□□□□ -1.24
UBR1-204ENST00000563239 ZSCAN26Q16670 478 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 ZNF718Q3SXZ3 478 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 SLC35D3Q5M8T2 416 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 ARL9Q6T311 187 aa7.29□□□□□ -1.24
UBR1-204ENST00000563239 DPY19L4Q7Z388 723 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms