RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 PLAUP00749 431 aa16.28■□□□□ 0.2
RAB40C-207ENST00000563109 HCCSP53701 268 aa16.28■□□□□ 0.2
RAB40C-207ENST00000563109 TPTEP56180 551 aa16.28■□□□□ 0.2
RAB40C-207ENST00000563109 RPS23P62266 143 aaKnown RBP16.28■□□□□ 0.2
RAB40C-207ENST00000563109 SNTB2Q13425 540 aaKnown RBP16.28■□□□□ 0.2
RAB40C-207ENST00000563109 RHOUQ7L0Q8 258 aa16.28■□□□□ 0.2
RAB40C-207ENST00000563109 KRT77Q7Z794 578 aa16.28■□□□□ 0.2
RAB40C-207ENST00000563109 PAQR4Q8N4S7 273 aaPredicted RBP16.28■□□□□ 0.2
RAB40C-207ENST00000563109 SLC7A6Q92536 515 aa16.28■□□□□ 0.2
RAB40C-207ENST00000563109 MYCBPQ99417 103 aaPredicted RBP16.28■□□□□ 0.2
RAB40C-207ENST00000563109 ELOVL3Q9HB03 270 aa16.28■□□□□ 0.2
RAB40C-207ENST00000563109 COPS3Q9UNS2 423 aa16.28■□□□□ 0.2
RAB40C-207ENST00000563109 EXOGQ9Y2C4 368 aaKnown RBP16.28■□□□□ 0.2
RAB40C-207ENST00000563109 KLHDC2Q9Y2U9 406 aa16.28■□□□□ 0.2
RAB40C-207ENST00000563109 F5H5K5 113 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 APOC1P02654 83 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 DBHP09172 617 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 PCSK6P29122 969 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 RAD52P43351 418 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 RGS6P49758 472 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 CXCR4P61073 352 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 CSNK2BP67870 215 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 ZNF672Q499Z4 452 aaPredicted RBP16.27■□□□□ 0.2
RAB40C-207ENST00000563109 ZNF322Q6U7Q0 402 aaPredicted RBP16.27■□□□□ 0.2
RAB40C-207ENST00000563109 NUP37Q8NFH4 326 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 AKAP1Q92667 903 aaKnown RBP eCLIP16.27■□□□□ 0.2
RAB40C-207ENST00000563109 MRPL48Q96GC5 212 aaKnown RBP16.27■□□□□ 0.2
RAB40C-207ENST00000563109 C4orf45Q96LM5 186 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 AMELYQ99218 206 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 KCNJ15Q99712 375 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 MROQ9BYG7 248 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 TTTY10Q9BZA0 68 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 BCL2L14Q9BZR8 327 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 OR51B6Q9H340 312 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 IKZF2Q9UKS7 526 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 GRIP1Q9Y3R0 1128 aa16.27■□□□□ 0.2
RAB40C-207ENST00000563109 PTPN13Q12923 2485 aa16.27■□□□□ 0.19
RAB40C-207ENST00000563109 A0A1W2PQL4 384 aaPredicted RBP16.26■□□□□ 0.19
RAB40C-207ENST00000563109 DAPL1A0PJW8 107 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 EFCAB10A6NFE3 127 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 M0R135 149 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 FAM157BP0CG42 384 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 NR4A1P22736 598 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 OPRL1P41146 370 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 SLC6A9P48067 706 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 EGR3Q06889 387 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 DEGS2Q6QHC5 323 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 LRRN1Q6UXK5 716 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 ACBD7Q8N6N7 88 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 ZNF283Q8N7M2 679 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 BPIFB6Q8NFQ5 453 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 FBXW5Q969U6 566 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 ZNF799Q96GE5 643 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 OR8B4Q96RC9 309 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 NIPAL2Q9H841 368 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 UBTD1Q9HAC8 227 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 INPP5EQ9NRR6 644 aa16.26■□□□□ 0.19
RAB40C-207ENST00000563109 MRPS18AQ9NVS2 196 aaKnown RBP16.26■□□□□ 0.19
RAB40C-207ENST00000563109 VSTM5A8MXK1 200 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 HS3ST1O14792 307 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 SMPD2O60906 423 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 ZNF254O75437 659 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 KRT8P05787 483 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 WNT5AP41221 380 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 PRKXP51817 358 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 RIDAP52758 137 aaKnown RBP16.25■□□□□ 0.19
RAB40C-207ENST00000563109 UCP2P55851 309 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 HGFACQ04756 655 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 MED21Q13503 144 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 KRTAP27-1Q3LI81 207 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 C6orf141Q5SZD1 244 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 VHLLQ6RSH7 139 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 DRAM2Q6UX65 266 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 FAM220AQ7Z4H9 259 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 C1orf174Q8IYL3 243 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 ZNF679Q8IYX0 411 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 RFLNBQ8N5W9 214 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 OR52I1Q8NGK6 324 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 ABHD4Q8TB40 342 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 SNX33Q8WV41 574 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 COG8Q96MW5 612 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 CA10Q9NS85 328 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 PLCXD1Q9NUJ7 323 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 SCN3BQ9NY72 215 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 CISD1Q9NZ45 108 aaKnown RBP16.25■□□□□ 0.19
RAB40C-207ENST00000563109 CNOT2Q9NZN8 540 aaKnown RBP16.25■□□□□ 0.19
RAB40C-207ENST00000563109 LRP12Q9Y561 859 aa16.25■□□□□ 0.19
RAB40C-207ENST00000563109 J3QW42 95 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 SLC1A7O00341 560 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 DENRO43583 198 aaKnown RBP16.24■□□□□ 0.19
RAB40C-207ENST00000563109 ICMTO60725 284 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 LCKP06239 509 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 ACSM4P0C7M7 580 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 PIPP12273 146 aaPredicted RBP16.24■□□□□ 0.19
RAB40C-207ENST00000563109 OTX1P32242 354 aaPredicted RBP16.24■□□□□ 0.19
RAB40C-207ENST00000563109 CX3CR1P49238 355 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 NKX6-1P78426 367 aaPredicted RBP16.24■□□□□ 0.19
RAB40C-207ENST00000563109 ROM1Q03395 351 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 LAIR2Q6ISS4 152 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 RFPL4BQ6ZWI9 263 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms