RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 OR51V1Q9H2C8 321 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 CDH20Q9HBT6 801 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 FAM118AQ9NWS6 357 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 FBXO9Q9UK97 447 aaPredicted RBP11.54□□□□□ -0.56
CDH1-204ENST00000562118 POU2F3Q9UKI9 436 aa11.54□□□□□ -0.56
CDH1-204ENST00000562118 SLC22A31A6NKX4 558 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 HLA-DQA2P01906 255 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 OR4A8P0C604 315 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 ACSM4P0C7M7 580 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 ALOX5APP20292 161 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 HTR1FP30939 366 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 OPRL1P41146 370 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 RPS27P42677 84 aaKnown RBP11.53□□□□□ -0.56
CDH1-204ENST00000562118 RAD52P43351 418 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 RGS6P49758 472 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 PPOXP50336 477 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 ADARB1P78563 741 aaKnown RBP11.53□□□□□ -0.56
CDH1-204ENST00000562118 GALK2Q01415 458 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 SLC34A1Q06495 639 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 OCLNQ16625 522 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 LCN1P1Q5VSP4 162 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 DNM1P46Q6ZS02 220 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 SHFQ7M4L6 423 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 SLC16A9Q7RTY1 509 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 DPY19L4Q7Z388 723 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 DCXRQ7Z4W1 244 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 BCDIN3DQ7Z5W3 292 aaKnown RBP11.53□□□□□ -0.56
CDH1-204ENST00000562118 FBXL14Q8N1E6 418 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 RHOXF1Q8NHV9 184 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 SLC7A6Q92536 515 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 MRPL37Q9BZE1 423 aaKnown RBP11.53□□□□□ -0.56
CDH1-204ENST00000562118 YIPF3Q9GZM5 350 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 ADGRL4Q9HBW9 690 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 WARS2Q9UGM6 360 aaKnown RBP11.53□□□□□ -0.56
CDH1-204ENST00000562118 LAMP3Q9UQV4 416 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 POLR1DQ9Y2S0 133 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 USF3Q68DE3 2245 aa11.53□□□□□ -0.56
CDH1-204ENST00000562118 LOC100130705A0A1B0GUX0 176 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 ZNF878C9JN71 531 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 H0YJX3 145 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 J3QRE1 110 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 SELENOFO60613 162 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 NGFP01138 241 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 IGHV3-13P01766 116 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 DBHP09172 617 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 NUDT6P53370 316 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 ROM1Q03395 351 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 ZIK1Q3SY52 487 aaPredicted RBP11.52□□□□□ -0.57
CDH1-204ENST00000562118 PRSS57Q6UWY2 283 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 UNQ6126/PRO20091Q6UXV3 157 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 SPNS3Q6ZMD2 512 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 PRSS45Q7RTY3 260 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 ERI1Q8IV48 349 aaKnown RBP11.52□□□□□ -0.57
CDH1-204ENST00000562118 ENTHD1Q8IYW4 607 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 OR2AJ1Q8NGZ0 328 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 FAM81AQ8TBF8 368 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 NRG4Q8WWG1 115 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 SLAMF6Q96DU3 332 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 ZNF582Q96NG8 517 aaPredicted RBP11.52□□□□□ -0.57
CDH1-204ENST00000562118 IL4I1Q96RQ9 567 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 AMELYQ99218 206 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 MNTQ99583 582 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 ABHD6Q9BV23 337 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 CDADC1Q9BWV3 514 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 CXorf56Q9H5V9 222 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 ELOVL3Q9HB03 270 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 CMAHPQ9Y471 501 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 HIVEP1P15822 2718 aa11.52□□□□□ -0.57
CDH1-204ENST00000562118 A0A1B0GWJ7 208 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 ABHD16AO95870 558 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 SPARCP09486 303 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 FAM157BP0CG42 384 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 PTH2RP49190 550 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 ERVS71-1P61550 626 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 KLHL12Q53G59 568 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 ZNF691Q5VV52 312 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 MEDAGQ5VYS4 303 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 RGS7BPQ6MZT1 257 aaPredicted RBP11.51□□□□□ -0.57
CDH1-204ENST00000562118 DEGS2Q6QHC5 323 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 ARL9Q6T311 187 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 FBXW12Q6X9E4 464 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.51□□□□□ -0.57
CDH1-204ENST00000562118 OR6N2Q8NGY6 317 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 FBLIM1Q8WUP2 373 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 APH1BQ8WW43 257 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 UBE2FQ969M7 185 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 COG8Q96MW5 612 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 MYEF2Q9P2K5 600 aaKnown RBP11.51□□□□□ -0.57
CDH1-204ENST00000562118 KLHDC2Q9Y2U9 406 aa11.51□□□□□ -0.57
CDH1-204ENST00000562118 TANC2Q9HCD6 1990 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 FLNAP21333 2647 aaKnown RBP11.5□□□□□ -0.57
CDH1-204ENST00000562118 PRR32B1ATL7 298 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 H0YAE9 185 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 MPZL2O60487 215 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 ADH4P08319 380 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 SBK2P0C263 348 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 KITLGP21583 273 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 ANOS1P23352 680 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 DCTDP32321 178 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 PPP1CBP62140 327 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms