RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 CTAG2O75638 210 aa4.02□□□□□ -1.77
SMG1-204ENST00000561940 SRP72O76094 671 aaKnown RBP4.02□□□□□ -1.77
SMG1-204ENST00000561940 BCKDHBP21953 392 aa4.02□□□□□ -1.77
SMG1-204ENST00000561940 HOXA9P31269 272 aa4.02□□□□□ -1.77
SMG1-204ENST00000561940 RND2P52198 227 aa4.02□□□□□ -1.77
SMG1-204ENST00000561940 ADARB1P78563 741 aaKnown RBP4.02□□□□□ -1.77
SMG1-204ENST00000561940 TWF1Q12792 350 aa4.02□□□□□ -1.77
SMG1-204ENST00000561940 TMEM255AQ5JRV8 349 aa4.02□□□□□ -1.77
SMG1-204ENST00000561940 AGR3Q8TD06 166 aa4.02□□□□□ -1.77
SMG1-204ENST00000561940 SLC25A39Q9BZJ4 359 aaPredicted RBP4.02□□□□□ -1.77
SMG1-204ENST00000561940 PLA2G2FQ9BZM2 168 aa4.02□□□□□ -1.77
SMG1-204ENST00000561940 SAMSN1Q9NSI8 373 aaKnown RBP4.02□□□□□ -1.77
SMG1-204ENST00000561940 HRASLS2Q9NWW9 162 aa4.02□□□□□ -1.77
SMG1-204ENST00000561940 RBAKQ9NYW8 714 aaPredicted RBP4.02□□□□□ -1.77
SMG1-204ENST00000561940 ZNF629Q9UEG4 869 aaPredicted RBP4.02□□□□□ -1.77
SMG1-204ENST00000561940 TOPAZ1Q8N9V7 1692 aa4.02□□□□□ -1.77
SMG1-204ENST00000561940 NSD3Q9BZ95 1437 aa4.02□□□□□ -1.77
SMG1-204ENST00000561940 SBF2Q86WG5 1849 aa4.02□□□□□ -1.77
SMG1-204ENST00000561940 POLR3AO14802 1390 aaPredicted RBP4.02□□□□□ -1.77
SMG1-204ENST00000561940 A0A0C4DFX4 3053 aa4.01□□□□□ -1.77
SMG1-204ENST00000561940 CENPJQ9HC77 1338 aaPredicted RBP4.01□□□□□ -1.77
SMG1-204ENST00000561940 TRBV9A0A0B4J1U6 114 aa4.01□□□□□ -1.77
SMG1-204ENST00000561940 H0YHG0 523 aa4.01□□□□□ -1.77
SMG1-204ENST00000561940 ASGR1P07306 291 aa4.01□□□□□ -1.77
SMG1-204ENST00000561940 ERCC1P07992 297 aaPredicted RBP4.01□□□□□ -1.77
SMG1-204ENST00000561940 ZDHHC11BP0C7U3 371 aa4.01□□□□□ -1.77
SMG1-204ENST00000561940 UQCRFS1P47985 274 aa4.01□□□□□ -1.77
SMG1-204ENST00000561940 HMGCS1Q01581 520 aa4.01□□□□□ -1.77
SMG1-204ENST00000561940 CAPRIN1Q14444 709 aaKnown RBP4.01□□□□□ -1.77
SMG1-204ENST00000561940 PTPN20Q4JDL3 420 aa4.01□□□□□ -1.77
SMG1-204ENST00000561940 TMEM53Q6P2H8 277 aa4.01□□□□□ -1.77
SMG1-204ENST00000561940 DNAJC24Q6P3W2 148 aa4.01□□□□□ -1.77
SMG1-204ENST00000561940 PEX26Q7Z412 305 aa4.01□□□□□ -1.77
SMG1-204ENST00000561940 OAFQ86UD1 273 aa4.01□□□□□ -1.77
SMG1-204ENST00000561940 SRSF12Q8WXF0 261 aaKnown RBP4.01□□□□□ -1.77
SMG1-204ENST00000561940 ECHDC3Q96DC8 303 aa4.01□□□□□ -1.77
SMG1-204ENST00000561940 FAM210BQ96KR6 192 aa4.01□□□□□ -1.77
SMG1-204ENST00000561940 ZNF285Q96NJ3 590 aa4.01□□□□□ -1.77
SMG1-204ENST00000561940 TEKT3Q9BXF9 490 aa4.01□□□□□ -1.77
SMG1-204ENST00000561940 ZNF223Q9UK11 482 aaPredicted RBP4.01□□□□□ -1.77
SMG1-204ENST00000561940 CLTCL1P53675 1640 aa4.01□□□□□ -1.77
SMG1-204ENST00000561940 KDM6AO15550 1401 aaPredicted RBP4.01□□□□□ -1.77
SMG1-204ENST00000561940 YTHDC2Q9H6S0 1430 aaKnown RBP4.01□□□□□ -1.77
SMG1-204ENST00000561940 TNRC18O15417 2968 aaPredicted RBP4.01□□□□□ -1.77
SMG1-204ENST00000561940 WDR19Q8NEZ3 1342 aa4□□□□□ -1.77
SMG1-204ENST00000561940 NUP214P35658 2090 aaPredicted RBP4□□□□□ -1.77
SMG1-204ENST00000561940 A0A1B0GW55 424 aa4□□□□□ -1.77
SMG1-204ENST00000561940 TMX2-CTNND1H3BSU7 103 aa4□□□□□ -1.77
SMG1-204ENST00000561940 RTL8CO15255 209 aa4□□□□□ -1.77
SMG1-204ENST00000561940 EIF4E2O60573 245 aaKnown RBP4□□□□□ -1.77
SMG1-204ENST00000561940 FABP3P05413 133 aa4□□□□□ -1.77
SMG1-204ENST00000561940 PLEKP08567 350 aaPredicted RBP4□□□□□ -1.77
SMG1-204ENST00000561940 DUX4L2P0CJ85 424 aa4□□□□□ -1.77
SMG1-204ENST00000561940 DUX4L3P0CJ86 424 aa4□□□□□ -1.77
SMG1-204ENST00000561940 DUX4L5P0CJ88 424 aa4□□□□□ -1.77
SMG1-204ENST00000561940 DUX4L6P0CJ89 424 aa4□□□□□ -1.77
SMG1-204ENST00000561940 DUX4L7P0CJ90 424 aa4□□□□□ -1.77
SMG1-204ENST00000561940 GPX4P36969 197 aaPredicted RBP4□□□□□ -1.77
SMG1-204ENST00000561940 RPS5P46782 204 aaKnown RBP4□□□□□ -1.77
SMG1-204ENST00000561940 ZNF726P1Q15940 193 aa4□□□□□ -1.77
SMG1-204ENST00000561940 ANKRD22Q5VYY1 191 aa4□□□□□ -1.77
SMG1-204ENST00000561940 DUX4L9Q6RFH8 374 aaPredicted RBP4□□□□□ -1.77
SMG1-204ENST00000561940 MBOAT1Q6ZNC8 495 aa4□□□□□ -1.77
SMG1-204ENST00000561940 H2AFVQ71UI9 128 aa4□□□□□ -1.77
SMG1-204ENST00000561940 GABRG1Q8N1C3 465 aa4□□□□□ -1.77
SMG1-204ENST00000561940 DUSP18Q8NEJ0 188 aa4□□□□□ -1.77
SMG1-204ENST00000561940 BPIFCQ8NFQ6 507 aa4□□□□□ -1.77
SMG1-204ENST00000561940 LYPD6BQ8NI32 183 aa4□□□□□ -1.77
SMG1-204ENST00000561940 NUBPLQ8TB37 319 aa4□□□□□ -1.77
SMG1-204ENST00000561940 MARCH1Q8TCQ1 289 aa4□□□□□ -1.77
SMG1-204ENST00000561940 CEP170P1Q96L14 293 aa4□□□□□ -1.77
SMG1-204ENST00000561940 BEX1Q9HBH7 125 aa4□□□□□ -1.77
SMG1-204ENST00000561940 DUX4Q9UBX2 424 aa4□□□□□ -1.77
SMG1-204ENST00000561940 LGALS13Q9UHV8 139 aa4□□□□□ -1.77
SMG1-204ENST00000561940 CD84Q9UIB8 345 aa4□□□□□ -1.77
SMG1-204ENST00000561940 PSG8Q9UQ74 426 aa4□□□□□ -1.77
SMG1-204ENST00000561940 SLC17A4Q9Y2C5 497 aa4□□□□□ -1.77
SMG1-204ENST00000561940 FMN2Q9NZ56 1722 aa4□□□□□ -1.77
SMG1-204ENST00000561940 ANKRD36BQ8N2N9 1353 aa4□□□□□ -1.77
SMG1-204ENST00000561940 ALS2Q96Q42 1657 aa4□□□□□ -1.77
SMG1-204ENST00000561940 QSER1Q2KHR3 1735 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 A0A096LNJ9 63 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 NDUFAB1O14561 156 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 NUPL2O15504 423 aaKnown RBP3.99□□□□□ -1.77
SMG1-204ENST00000561940 MYL2P10916 166 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 STOMP27105 288 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 CX3CR1P49238 355 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 EIF3EP60228 445 aaKnown RBP3.99□□□□□ -1.77
SMG1-204ENST00000561940 MECOMQ03112 1051 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 POU2AF1Q16633 256 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 CCNJQ5T5M9 372 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 TEX43Q6ZNM6 134 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 PQLC3Q8N755 202 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 OR4S2Q8NH73 311 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 ZFP90Q8TF47 636 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 TSEN15Q8WW01 171 aaKnown RBP3.99□□□□□ -1.77
SMG1-204ENST00000561940 FAM104AQ969W3 186 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 COL21A1Q96P44 957 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 TMEM165Q9HC07 324 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 DDX18Q9NVP1 670 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms