RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 SRYQ05066 204 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 IL18Q14116 193 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 P2RY14Q15391 338 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 PYDC2Q56P42 97 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 ZNF433Q8N7K0 673 aaPredicted RBP11.37□□□□□ -0.59
SNX1-211ENST00000560829 OR4M1Q8NGD0 313 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 CRLF2Q9HC73 371 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 BRD7Q9NPI1 651 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 TMEM38BQ9NVV0 291 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 EMC3Q9P0I2 261 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 TBC1D24Q9ULP9 559 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 PCDHGA9Q9Y5G4 932 aaKnown RBP11.37□□□□□ -0.59
SNX1-211ENST00000560829 A0A1W2PQ09 198 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 IGHG3P01860 377 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 CST2P09228 141 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 SCN1BQ07699 218 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 TAF13Q15543 124 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 NRN1LQ496H8 165 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 HES5Q5TA89 166 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 WDYHV1Q96HA8 205 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 PARPBPQ9NWS1 579 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 NOSIPQ9Y314 301 aaKnown RBP11.36□□□□□ -0.59
SNX1-211ENST00000560829 FREM3P0C091 2139 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 hCG_2014768A0A024R1R8 64 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 A0A0B4J203 849 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 OR6C65A6NJZ3 312 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 ANXA2P2A6NMY6 339 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 P2RY10O00398 339 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 ANXA2P07355 339 aaKnown RBP11.36□□□□□ -0.59
SNX1-211ENST00000560829 OTX1P32242 354 aaPredicted RBP11.36□□□□□ -0.59
SNX1-211ENST00000560829 NR4A2P43354 598 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 RNPS1Q15287 305 aaKnown RBP11.36□□□□□ -0.59
SNX1-211ENST00000560829 CCDC92Q53HC0 331 aaPredicted RBP11.36□□□□□ -0.59
SNX1-211ENST00000560829 LINGO2Q7L985 606 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 PRSS45Q7RTY3 260 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 Q8N402 240 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 OR13C3Q8NGS6 347 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 ZNF671Q8TAW3 534 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 FNDC9Q8TBE3 224 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 LGALS14Q8TCE9 139 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 DEFB127Q9H1M4 99 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 LIN7BQ9HAP6 207 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 GPR35Q9HC97 309 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 SPRR3Q9UBC9 169 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 CKLFQ9UBR5 152 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 MALT1Q9UDY8 824 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 ETV7Q9Y603 341 aa11.36□□□□□ -0.59
SNX1-211ENST00000560829 ASPMQ8IZT6 3477 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 MED13Q9UHV7 2174 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 RIF1Q5UIP0 2472 aaKnown RBP11.35□□□□□ -0.59
SNX1-211ENST00000560829 A0A1B0GTI1 187 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 H3BSH0 61 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 MRPL33O75394 65 aaKnown RBP11.35□□□□□ -0.59
SNX1-211ENST00000560829 MAS1P04201 325 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 CCL1P22362 96 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 PITPNBP48739 271 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 CX3CR1P49238 355 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 PRKXP51817 358 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 ZNF121P58317 390 aaPredicted RBP11.35□□□□□ -0.59
SNX1-211ENST00000560829 NHLH1Q02575 133 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 ASAH1Q13510 395 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 UBE2NLQ5JXB2 153 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 ELFN2Q5R3F8 820 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 PYHIN1Q6K0P9 492 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 IGFL3Q6UXB1 125 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 BAIAP2L2Q6UXY1 529 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 GDPD3Q7L5L3 318 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 FBXO17Q96EF6 278 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 ALKBH3Q96Q83 286 aaPredicted RBP11.35□□□□□ -0.59
SNX1-211ENST00000560829 FOXB1Q99853 325 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 WACQ9BTA9 647 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 SLCO5A1Q9H2Y9 848 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 LDAHQ9H6V9 325 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 ZNF275Q9NSD4 429 aaPredicted RBP11.35□□□□□ -0.59
SNX1-211ENST00000560829 RABL2AQ9UBK7 228 aaPredicted RBP11.35□□□□□ -0.59
SNX1-211ENST00000560829 RABL2BQ9UNT1 228 aa11.35□□□□□ -0.59
SNX1-211ENST00000560829 A0A0G2JMP0 313 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 A0A0X1KG70 313 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 MEGF11A6BM72 1044 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 RPL36A-HNRNPH2H7BZ11 118 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 ZNF24P17028 368 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 CEACAM16Q2WEN9 425 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 TSPO2Q5TGU0 170 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 FAM166AQ6J272 317 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 TUSC5Q8IXB3 177 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 DNAAF1Q8NEP3 725 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 OR4M2Q8NGB6 313 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 OR8B12Q8NGG6 310 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 HDHD2Q9H0R4 259 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 ABCG5Q9H222 651 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 GP6Q9HCN6 339 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 TAS2R4Q9NYW5 299 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 OR5V1Q9UGF6 321 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 STEAP1Q9UHE8 339 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 KLK13Q9UKR3 277 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 ZNF175Q9Y473 711 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 CELSR3Q9NYQ7 3312 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 A0A1B0GVC2 190 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 SLC17A2O00624 439 aa11.34□□□□□ -0.59
SNX1-211ENST00000560829 SYT7O43581 403 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms