RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 ACOXLQ9NUZ1 547 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 PARPBPQ9NWS1 579 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 GALNT8Q9NY28 637 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 SLCO1C1Q9NYB5 712 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 ASH2LQ9UBL3 628 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 MALT1Q9UDY8 824 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 WARS2Q9UGM6 360 aaKnown RBP4.55□□□□□ -1.68
SPG11-220ENST00000559933 FBXL3Q9UKT7 428 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.55□□□□□ -1.68
SPG11-220ENST00000559933 EXOGQ9Y2C4 368 aaKnown RBP4.55□□□□□ -1.68
SPG11-220ENST00000559933 POLR1DQ9Y2S0 133 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 RPL36Q9Y3U8 105 aaKnown RBP4.55□□□□□ -1.68
SPG11-220ENST00000559933 PRR14LQ5THK1 2151 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 HIVEP3Q5T1R4 2406 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 PCNX1Q96RV3 2341 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 MYO7BQ6PIF6 2116 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 NCOA6Q14686 2063 aaPredicted RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 ADGRG4Q8IZF6 3080 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 DAPL1A0PJW8 107 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 EFCAB10A6NFE3 127 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 HSPB2A8KAH6 182 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 ZNF670-ZNF695F2Z2N8 137 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 RPL36A-HNRNPH2H7BZ11 118 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 C19orf84I3L1E1 186 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 INMTO95050 263 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 RPP14O95059 124 aaKnown RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 TNFAIP8O95379 198 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 ABHD16AO95870 558 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 MMP7P09237 267 aaPredicted RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 CCDC159P0C7I6 412 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 SLC2A1P11166 492 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 CD79AP11912 226 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 PIPP12273 146 aaPredicted RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 ZNF32P17041 273 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 COX5AP20674 150 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 PCMT1P22061 227 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 MPGP29372 298 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 GTF2A1P52655 376 aaPredicted RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 SLURP1P55000 103 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 CASP6P55212 293 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 OR12D2P58182 307 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 MRPS34P82930 218 aaKnown RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 HSF2Q03933 536 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 GLO1Q04760 184 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 SPOCK1Q08629 439 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 RAB40BQ12829 278 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 IRF3Q14653 427 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 HSPB2Q16082 182 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 ODF4Q2M2E3 257 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 TBRG1Q3YBR2 411 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 KCTD21Q4G0X4 260 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 CCDC92Q53HC0 331 aaPredicted RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 SLC18B1Q6NT16 456 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 STAC2Q6ZMT1 411 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 Q6ZT83 130 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 KCTD8Q6ZWB6 473 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 BHLHA15Q7RTS1 189 aaPredicted RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 SLC16A14Q7RTX9 510 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 SLC16A9Q7RTY1 509 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 MDP1Q86V88 176 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 SPARTQ8N0X7 666 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 GABRG1Q8N1C3 465 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 ZNF433Q8N7K0 673 aaPredicted RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 FAM169BQ8N8A8 192 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 WDR31Q8NA23 367 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 POMGNT2Q8NAT1 580 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 TSPAN14Q8NG11 270 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 OR10H5Q8NGA6 315 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 OR13C5Q8NGS8 318 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 ST7LQ8TDW4 575 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 SPRYD4Q8WW59 207 aaPredicted RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 BCL2L2Q92843 193 aaPredicted RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 RFKQ969G6 155 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 TMIGD2Q96BF3 282 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 S100PBPQ96BU1 408 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 SLAMF6Q96DU3 332 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 ZC3HAV1LQ96H79 300 aaKnown RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 TMEM80Q96HE8 168 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 Q96MT0 163 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 ABHD6Q9BV23 337 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 ALG8Q9BVK2 526 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 OR51B6Q9H340 312 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 DUSP21Q9H596 190 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 MARCH7Q9H992 704 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 FGF20Q9NP95 211 aaPredicted RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 B3GAT2Q9NPZ5 323 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 PLSCR4Q9NRQ2 329 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 GLRX2Q9NS18 164 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 PLCXD1Q9NUJ7 323 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 MRPS18AQ9NVS2 196 aaKnown RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 SCN3BQ9NY72 215 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 MRM2Q9UI43 246 aaKnown RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 ERRFI1Q9UJM3 462 aaPredicted RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 LAMP5Q9UJQ1 280 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 GNG8Q9UK08 70 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 IKZF2Q9UKS7 526 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 DIMT1Q9UNQ2 313 aaKnown RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 MOKQ9UQ07 419 aa4.54□□□□□ -1.68
SPG11-220ENST00000559933 LSM2Q9Y333 95 aaKnown RBP4.54□□□□□ -1.68
SPG11-220ENST00000559933 TPRKBQ9Y3C4 175 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms