RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 BCDIN3DQ7Z5W3 292 aaKnown RBP8.72□□□□□ -1.01
USP3-216ENST00000559873 THAP5Q7Z6K1 395 aa8.72□□□□□ -1.01
USP3-216ENST00000559873 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.72□□□□□ -1.01
USP3-216ENST00000559873 SLC35F2Q8IXU6 374 aa8.72□□□□□ -1.01
USP3-216ENST00000559873 FBXL14Q8N1E6 418 aa8.72□□□□□ -1.01
USP3-216ENST00000559873 ZNF611Q8N823 705 aa8.72□□□□□ -1.01
USP3-216ENST00000559873 CPEB3Q8NE35 698 aaKnown RBP8.72□□□□□ -1.01
USP3-216ENST00000559873 ST7LQ8TDW4 575 aa8.72□□□□□ -1.01
USP3-216ENST00000559873 THEM6Q8WUY1 208 aa8.72□□□□□ -1.01
USP3-216ENST00000559873 RNF133Q8WVZ7 376 aa8.72□□□□□ -1.01
USP3-216ENST00000559873 RNFT2Q96EX2 444 aa8.72□□□□□ -1.01
USP3-216ENST00000559873 MAP6Q96JE9 813 aa8.72□□□□□ -1.01
USP3-216ENST00000559873 ZNF184Q99676 751 aaPredicted RBP8.72□□□□□ -1.01
USP3-216ENST00000559873 KCNJ15Q99712 375 aa8.72□□□□□ -1.01
USP3-216ENST00000559873 ABHD6Q9BV23 337 aa8.72□□□□□ -1.01
USP3-216ENST00000559873 MROQ9BYG7 248 aa8.72□□□□□ -1.01
USP3-216ENST00000559873 TUBG2Q9NRH3 451 aa8.72□□□□□ -1.01
USP3-216ENST00000559873 CA10Q9NS85 328 aa8.72□□□□□ -1.01
USP3-216ENST00000559873 CENPMQ9NSP4 180 aa8.72□□□□□ -1.01
USP3-216ENST00000559873 SPG11Q96JI7 2443 aa8.72□□□□□ -1.01
USP3-216ENST00000559873 NBPF19A0A087WUL8 3843 aa8.72□□□□□ -1.01
USP3-216ENST00000559873 LOC100509620A0A075B734 347 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 H3BSA7 217 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 M0R135 149 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 SMPD2O60906 423 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 ZNF254O75437 659 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 CLIC3O95833 236 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 FADS2O95864 444 aaKnown RBP8.71□□□□□ -1.02
USP3-216ENST00000559873 H2BFMP0C1H6 154 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 OR2T7P0C7T2 308 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 DBTP11182 482 aaKnown RBP8.71□□□□□ -1.02
USP3-216ENST00000559873 CCL2P13500 99 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 GCH1P30793 250 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 APOBEC3AP31941 199 aaPredicted RBP8.71□□□□□ -1.02
USP3-216ENST00000559873 FABP6P51161 128 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 SELENOVP59797 346 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 SNRPD2P62316 118 aaKnown RBP8.71□□□□□ -1.02
USP3-216ENST00000559873 NKX6-1P78426 367 aaPredicted RBP8.71□□□□□ -1.02
USP3-216ENST00000559873 ZNF91Q05481 1191 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 EGR3Q06889 387 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 RAB40BQ12829 278 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 MED21Q13503 144 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 KLHL22Q53GT1 634 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 C6orf52Q5T4I8 152 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 RGS7BPQ6MZT1 257 aaPredicted RBP8.71□□□□□ -1.02
USP3-216ENST00000559873 DEGS2Q6QHC5 323 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 VHLLQ6RSH7 139 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 DRAM2Q6UX65 266 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 PAMR1Q6UXH9 720 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 B3GLCTQ6Y288 498 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 USP51Q70EK9 711 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 FAM220AQ7Z4H9 259 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 KRT77Q7Z794 578 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 MUC15Q8N387 334 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 OR10H4Q8NGA5 316 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 OR5L1Q8NGL2 311 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 OR2T27Q8NH04 317 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 ABHD4Q8TB40 342 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 APOBEC3DQ96AK3 386 aaPredicted RBP8.71□□□□□ -1.02
USP3-216ENST00000559873 ZNF799Q96GE5 643 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 C4orf45Q96LM5 186 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 DOK1Q99704 481 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 PLK3Q9H4B4 646 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 PNRC2Q9NPJ4 139 aaKnown RBP8.71□□□□□ -1.02
USP3-216ENST00000559873 TBCCD1Q9NVR7 557 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 IKZF2Q9UKS7 526 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 RAB26Q9ULW5 256 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 GRIP1Q9Y3R0 1128 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 CMAHPQ9Y471 501 aa8.71□□□□□ -1.02
USP3-216ENST00000559873 E7EQL1 145 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 F5H5K5 113 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 PLAUP00749 431 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 KRT8P05787 483 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 FAM157BP0CG42 384 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 ALOX5APP20292 161 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 OPRL1P41146 370 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 UCP2P55851 309 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 PSMA6P60900 246 aaKnown RBP8.7□□□□□ -1.02
USP3-216ENST00000559873 CXCR4P61073 352 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 ISL1P61371 349 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 ACTA2P62736 377 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 ACTG2P63267 376 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 HGFACQ04756 655 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 MALLQ13021 153 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 MOGQ16653 247 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 ZNF829Q3KNS6 432 aaPredicted RBP8.7□□□□□ -1.02
USP3-216ENST00000559873 ZNF322Q6U7Q0 402 aaPredicted RBP8.7□□□□□ -1.02
USP3-216ENST00000559873 RFPL4BQ6ZWI9 263 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 SPATC1Q76KD6 591 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 ZNF283Q8N7M2 679 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 OR1J1Q8NGS3 322 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 CNIH3Q8TBE1 160 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 SMAP2Q8WU79 429 aaPredicted RBP8.7□□□□□ -1.02
USP3-216ENST00000559873 TMEM171Q8WVE6 324 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 APH1BQ8WW43 257 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 NINJ1Q92982 152 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 UBE2FQ969M7 185 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 PIGTQ969N2 578 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 LURAP1Q96LR2 239 aa8.7□□□□□ -1.02
USP3-216ENST00000559873 CCL19Q99731 98 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms