RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 AQP6Q13520 282 aa13.54□□□□□ -0.24
CDC42BPB-205ENST00000559245 FHL1Q13642 323 aa13.54□□□□□ -0.24
CDC42BPB-205ENST00000559245 ZNF181Q2M3W8 571 aa13.54□□□□□ -0.24
CDC42BPB-205ENST00000559245 TTMPQ5BVD1 217 aa13.54□□□□□ -0.24
CDC42BPB-205ENST00000559245 RABL3Q5HYI8 236 aa13.54□□□□□ -0.24
CDC42BPB-205ENST00000559245 RUSC1-AS1Q66K80 236 aa13.54□□□□□ -0.24
CDC42BPB-205ENST00000559245 FBXW12Q6X9E4 464 aa13.54□□□□□ -0.24
CDC42BPB-205ENST00000559245 MOGAT3Q86VF5 341 aa13.54□□□□□ -0.24
CDC42BPB-205ENST00000559245 CALHM3Q86XJ0 350 aa13.54□□□□□ -0.24
CDC42BPB-205ENST00000559245 PCYOX1LQ8NBM8 494 aa13.54□□□□□ -0.24
CDC42BPB-205ENST00000559245 C10orf82Q8WW14 230 aa13.54□□□□□ -0.24
CDC42BPB-205ENST00000559245 PKP2Q99959 881 aa13.54□□□□□ -0.24
CDC42BPB-205ENST00000559245 CDADC1Q9BWV3 514 aa13.54□□□□□ -0.24
CDC42BPB-205ENST00000559245 A4GNTQ9UNA3 340 aa13.54□□□□□ -0.24
CDC42BPB-205ENST00000559245 OR6C6A6NF89 314 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 F5H5P2 479 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 J3QW42 95 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 FBP2O00757 339 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 MLNRO43193 412 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 MELTFP08582 738 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 DBHP09172 617 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 CYLC2Q14093 348 aaPredicted RBP13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 ANKDD1AQ495B1 522 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 OTPQ5XKR4 325 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 WDR25Q64LD2 544 aaPredicted RBP13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 LYPD2Q6UXB3 125 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 OAFQ86UD1 273 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 NRMQ8IXM6 262 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 C1orf87Q8N0U7 546 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 TMEM86BQ8N661 226 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 OR5L1Q8NGL2 311 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 OR1F12Q8NHA8 337 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 STON2Q8WXE9 905 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 UBE2FQ969M7 185 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 RASD2Q96D21 266 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 FAM71F1Q96KD3 344 aaPredicted RBP13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 PRRC1Q96M27 445 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 ZNF582Q96NG8 517 aaPredicted RBP13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 ECSITQ9BQ95 431 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 SLC30A2Q9BRI3 323 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 ASH2LQ9UBL3 628 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 GRHPRQ9UBQ7 328 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 ADAM18Q9Y3Q7 739 aa13.53□□□□□ -0.24
CDC42BPB-205ENST00000559245 TEX13CA0A0J9YWL9 993 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 EFCAB9A8MZ26 197 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 PHYHO14832 338 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 IFNA14P01570 189 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 CTLA4P16410 223 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 SELEP16581 610 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 FUT4P22083 530 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 IFNA8P32881 189 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 PMELP40967 661 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 RGS6P49758 472 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 PRKCDQ05655 676 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 CCDC92Q53HC0 331 aaPredicted RBP13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 CYBRD1Q53TN4 286 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 MESTQ5EB52 335 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 ASPHD2Q6ICH7 369 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 ZNF841Q6ZN19 808 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 DCDC5Q6ZRR9 648 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 OR13C2Q8NGS9 318 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 Q96M85 177 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 SH3GL1Q99961 368 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 RBM4BQ9BQ04 359 aaKnown RBP13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 PCGF1Q9BSM1 259 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 RNF114Q9Y508 228 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 POMT1Q9Y6A1 747 aa13.52□□□□□ -0.25
CDC42BPB-205ENST00000559245 PRSS37A4D1T9 235 aa13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 C22orf46C9J442 243 aa13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 XKRYO14609 159 aa13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 TNFRSF13BO14836 293 aaPredicted RBP13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 ENSAO43768 121 aaKnown RBP13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 AHCYL1O43865 530 aa13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 CD14P08571 375 aa13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 RPL4P36578 427 aaKnown RBP13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 SLC9A3P48764 834 aa13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 LSM6P62312 80 aaKnown RBP13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 PDCD1Q15116 288 aa13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 LRRC23Q53EV4 343 aaPredicted RBP13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 AGBL2Q5U5Z8 902 aa13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 ERICH5Q6P6B1 374 aa13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 ZNF620Q6ZNG0 422 aa13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 BHLHE23Q8NDY6 225 aa13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 DYDC1Q8WWB3 177 aa13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 APOBEC3DQ96AK3 386 aaPredicted RBP13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 TPD52L3Q96J77 140 aa13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 ZNF570Q96NI8 536 aa13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 RHCGQ9UBD6 479 aa13.51□□□□□ -0.25
CDC42BPB-205ENST00000559245 IQCF6A8MYZ5 107 aa13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 P2RY10O00398 339 aa13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 RER1O15258 196 aa13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 SFTPBP07988 381 aa13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 IRF2P14316 349 aa13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 CFHR2P36980 270 aa13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 YAP1P46937 504 aaKnown RBP13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 RPL15P61313 204 aaKnown RBP13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 TRAM2Q15035 370 aa13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 FAM122BQ7Z309 247 aa13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 OFCC1Q8IZS5 231 aa13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 FAM156AQ8NDB6 213 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms