RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 DYNLRB1Q9NP97 96 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 STARD10Q9Y365 291 aa16.02■□□□□ 0.16
CASC4-209ENST00000559222 IGHV4-30-2A0A087WSY4 118 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 A0A1W2PPW3 197 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 C5orf63A6NC05 138 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 CCDC182A6NF36 153 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 ZNF593O00488 134 aaPredicted RBP16.01■□□□□ 0.15
CASC4-209ENST00000559222 GLCEO94923 617 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 HMGN1P05114 100 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 NAT2P11245 290 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 CD99P14209 185 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 PRSS12P56730 875 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 ESRRGP62508 458 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 SNAPC1Q16533 368 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 ZSCAN26Q16670 478 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 PCK2Q16822 640 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 KLHL12Q53G59 568 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 SPATC1Q76KD6 591 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 DCXRQ7Z4W1 244 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 ERI1Q8IV48 349 aaKnown RBP16.01■□□□□ 0.15
CASC4-209ENST00000559222 TIGD4Q8IY51 512 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 MAPK1IP1LQ8NDC0 245 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 OR2AJ1Q8NGZ0 328 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 SMR3AQ99954 134 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 CDADC1Q9BWV3 514 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 RIBC2Q9H4K1 309 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 TAAR3PQ9P1P4 343 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 EIF3KQ9UBQ5 218 aaKnown RBP16.01■□□□□ 0.15
CASC4-209ENST00000559222 KCNG2Q9UJ96 466 aa16.01■□□□□ 0.15
CASC4-209ENST00000559222 M0R233 179 aa16■□□□□ 0.15
CASC4-209ENST00000559222 SMAD7O15105 426 aaKnown RBP16■□□□□ 0.15
CASC4-209ENST00000559222 NCR1O76036 304 aa16■□□□□ 0.15
CASC4-209ENST00000559222 ALPLP05186 524 aa16■□□□□ 0.15
CASC4-209ENST00000559222 GSTT1P30711 240 aa16■□□□□ 0.15
CASC4-209ENST00000559222 EVX1P49640 407 aa16■□□□□ 0.15
CASC4-209ENST00000559222 EFNA4P52798 201 aa16■□□□□ 0.15
CASC4-209ENST00000559222 KLF3P57682 345 aaPredicted RBP16■□□□□ 0.15
CASC4-209ENST00000559222 GABPB1Q06547 395 aaPredicted RBP16■□□□□ 0.15
CASC4-209ENST00000559222 HNRNPA0Q13151 305 aaKnown RBP16■□□□□ 0.15
CASC4-209ENST00000559222 PQLC1Q8N2U9 271 aa16■□□□□ 0.15
CASC4-209ENST00000559222 OR6N2Q8NGY6 317 aa16■□□□□ 0.15
CASC4-209ENST00000559222 KLF14Q8TD94 323 aaPredicted RBP16■□□□□ 0.15
CASC4-209ENST00000559222 ST7LQ8TDW4 575 aa16■□□□□ 0.15
CASC4-209ENST00000559222 PLEKHA8Q96JA3 519 aa16■□□□□ 0.15
CASC4-209ENST00000559222 ATF6BQ99941 703 aa16■□□□□ 0.15
CASC4-209ENST00000559222 GABARAPL3Q9BY60 117 aa16■□□□□ 0.15
CASC4-209ENST00000559222 MARCH7Q9H992 704 aa16■□□□□ 0.15
CASC4-209ENST00000559222 ATPIF1Q9UII2 106 aa16■□□□□ 0.15
CASC4-209ENST00000559222 KLHDC2Q9Y2U9 406 aa16■□□□□ 0.15
CASC4-209ENST00000559222 ACANP16112 2415 aa16■□□□□ 0.15
CASC4-209ENST00000559222 ZFHX3Q15911 3703 aa16■□□□□ 0.15
CASC4-209ENST00000559222 LYNX1G3V0Z9 82 aa15.99■□□□□ 0.15
CASC4-209ENST00000559222 F12P00748 615 aaPredicted RBP15.99■□□□□ 0.15
CASC4-209ENST00000559222 ACSM4P0C7M7 580 aa15.99■□□□□ 0.15
CASC4-209ENST00000559222 LYNX1P0DP58 116 aa15.99■□□□□ 0.15
CASC4-209ENST00000559222 PAICSP22234 425 aaKnown RBP15.99■□□□□ 0.15
CASC4-209ENST00000559222 NAA10P41227 235 aaPredicted RBP15.99■□□□□ 0.15
CASC4-209ENST00000559222 EFNB1P98172 346 aa15.99■□□□□ 0.15
CASC4-209ENST00000559222 APOFQ13790 326 aa15.99■□□□□ 0.15
CASC4-209ENST00000559222 DPY19L4Q7Z388 723 aa15.99■□□□□ 0.15
CASC4-209ENST00000559222 CBR4Q8N4T8 237 aa15.99■□□□□ 0.15
CASC4-209ENST00000559222 TCEANCQ8N8B7 351 aa15.99■□□□□ 0.15
CASC4-209ENST00000559222 INTS14Q96SY0 518 aa15.99■□□□□ 0.15
CASC4-209ENST00000559222 SLC29A1Q99808 456 aa15.99■□□□□ 0.15
CASC4-209ENST00000559222 RBM4BQ9BQ04 359 aaKnown RBP15.99■□□□□ 0.15
CASC4-209ENST00000559222 GSX1Q9H4S2 264 aaPredicted RBP15.99■□□□□ 0.15
CASC4-209ENST00000559222 BARX1Q9HBU1 254 aaPredicted RBP15.99■□□□□ 0.15
CASC4-209ENST00000559222 PTTG3PQ9NZH4 202 aa15.99■□□□□ 0.15
CASC4-209ENST00000559222 VSTM5A8MXK1 200 aa15.98■□□□□ 0.15
CASC4-209ENST00000559222 RNF223E7ERA6 249 aa15.98■□□□□ 0.15
CASC4-209ENST00000559222 F5H5K5 113 aa15.98■□□□□ 0.15
CASC4-209ENST00000559222 IGHV3-13P01766 116 aa15.98■□□□□ 0.15
CASC4-209ENST00000559222 BMP4P12644 408 aa15.98■□□□□ 0.15
CASC4-209ENST00000559222 MAGEB1P43366 347 aa15.98■□□□□ 0.15
CASC4-209ENST00000559222 HCCSP53701 268 aa15.98■□□□□ 0.15
CASC4-209ENST00000559222 EIF2B1Q14232 305 aaKnown RBP15.98■□□□□ 0.15
CASC4-209ENST00000559222 HLXQ14774 488 aaPredicted RBP15.98■□□□□ 0.15
CASC4-209ENST00000559222 NKPD1Q17RQ9 610 aa15.98■□□□□ 0.15
CASC4-209ENST00000559222 ZIK1Q3SY52 487 aaPredicted RBP15.98■□□□□ 0.15
CASC4-209ENST00000559222 TEX30Q5JUR7 227 aa15.98■□□□□ 0.15
CASC4-209ENST00000559222 MBNL2Q5VZF2 373 aaKnown RBP15.98■□□□□ 0.15
CASC4-209ENST00000559222 SLAMF6Q96DU3 332 aa15.98■□□□□ 0.15
CASC4-209ENST00000559222 COX4I2Q96KJ9 171 aa15.98■□□□□ 0.15
CASC4-209ENST00000559222 IL4I1Q96RQ9 567 aa15.98■□□□□ 0.15
CASC4-209ENST00000559222 MBOAT4Q96T53 435 aa15.98■□□□□ 0.15
CASC4-209ENST00000559222 ELOVL3Q9HB03 270 aa15.98■□□□□ 0.15
CASC4-209ENST00000559222 DDX28Q9NUL7 540 aaKnown RBP15.98■□□□□ 0.15
CASC4-209ENST00000559222 TBCCD1Q9NVR7 557 aa15.98■□□□□ 0.15
CASC4-209ENST00000559222 USE1Q9NZ43 259 aa15.98■□□□□ 0.15
CASC4-209ENST00000559222 A0A096LNT2 108 aa15.97■□□□□ 0.15
CASC4-209ENST00000559222 ZSCAN5BA6NJL1 495 aa15.97■□□□□ 0.15
CASC4-209ENST00000559222 PRODHO43272 600 aa15.97■□□□□ 0.15
CASC4-209ENST00000559222 BAG2O95816 211 aa15.97■□□□□ 0.15
CASC4-209ENST00000559222 HPXP02790 462 aa15.97■□□□□ 0.15
CASC4-209ENST00000559222 MRPL3P09001 348 aaKnown RBP15.97■□□□□ 0.15
CASC4-209ENST00000559222 RBMXP38159 391 aaKnown RBP15.97■□□□□ 0.15
CASC4-209ENST00000559222 RPS7P62081 194 aaKnown RBP15.97■□□□□ 0.15
CASC4-209ENST00000559222 PSG7Q13046 419 aa15.97■□□□□ 0.15
CASC4-209ENST00000559222 ZNF718Q3SXZ3 478 aa15.97■□□□□ 0.15
CASC4-209ENST00000559222 SPRNQ5BIV9 151 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms